| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1149 |
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| Symbol | lpxD |
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| ID | 4603401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1399831 |
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| End bp | 1400856 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780496 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_927026 |
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| Protein GI | 119774286 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000218534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCAAG TGACTCTGGG CCAATTGGCC GAACATTTGG GAGCAGAACT CAAGGGCGAT
GGCAGTTTAC TGATCTCTTC AGTGGCCACC CTTGAAGATG CAGGTGCCGG ACAAATAAGC
TTTTTGGCCA ACAGTAAATA CCGTGCTCAG CTGGAAGGAA CCAAAGCGAG TGCCGTACTC
TTGTCACCGA AAGATGCTGG CACCTATGAA GGTAATGCCC TCATTCTCAA GGACCCCTAC
GTCGGTTTTG CCCGGGTCGC TCAATTGCTT GATACCACTC CCAATGCAGC TGAAGGTATA
CATGCTTCAG CTGTGATTGA CCCCAGCGCC CGTTTGGGAG AGGGAGTCAG CATTGGTGCC
AATGCCGTCA TTGGTGCCAA TGTGATCTTG GGTGATAAGG TACAAATAGG CCCTGGTACT
GTGGTGGGGC AGGACTCTAT CATAGGTTCA GGTACACGCC TTTGGGCCAA CGTTACCCTT
TACCATGATG TACATTTGGG CATGGACTGT ATTGTTCATT CGGGCGCAGT CATTGGCTCG
GATGGTTTTG GTTATGCCAA CGAACGGGGT AATTGGGTTA AGATCCCCCA GACCGGCGGC
GTGCGCATTG GTAACAATGT GGAAATCGGC GCCAGTACCA CCATCGACAG GGGGGCCCTG
TCCCATACTG AAATTCACGA TGGCGTTATT CTCGATAATC AGGTGCAAAT CGCACACAAC
GATGTGATTG GCGCCCACAC TGCGATTGCT GGCAACACCA CCATCGCCGG CAGTGTGACT
ATTGGTAAAT ACTGTATACT TGGTGGCAAT AGTGCCGTGG CTGGCCACCT GAGTATCGTC
GATGGCACTC ATGTCAGCGG CGCTACCAAC GTCACCAGTA TTATCCGTGA GCCAGGTGTG
TATTCTTCCG CCACTATCGC CATGGAAAAC AAGTTGTGGC GCCGTAACAC GGTGCGCTTC
AGACAACTGG ATGAGCTTTT CCAGCGCGTA AAGGTGCTGG AAGGCAAACA GCAAGAAGAA
AAGTAA
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| Protein sequence | MKQVTLGQLA EHLGAELKGD GSLLISSVAT LEDAGAGQIS FLANSKYRAQ LEGTKASAVL
LSPKDAGTYE GNALILKDPY VGFARVAQLL DTTPNAAEGI HASAVIDPSA RLGEGVSIGA
NAVIGANVIL GDKVQIGPGT VVGQDSIIGS GTRLWANVTL YHDVHLGMDC IVHSGAVIGS
DGFGYANERG NWVKIPQTGG VRIGNNVEIG ASTTIDRGAL SHTEIHDGVI LDNQVQIAHN
DVIGAHTAIA GNTTIAGSVT IGKYCILGGN SAVAGHLSIV DGTHVSGATN VTSIIREPGV
YSSATIAMEN KLWRRNTVRF RQLDELFQRV KVLEGKQQEE K
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