Gene Sama_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1132 
Symbol 
ID4603384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1381214 
End bp1381678 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content52% 
IMG OID639780479 
Productflavodoxin 
Protein accessionYP_927009 
Protein GI119774269 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.814005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG TTGACCTGGC ATTTGGCACT GTTTATGGCA GCGCGCAGTT TGTGGCTGAA 
ACCCTGGCAG ATGAACTCGC AGACTTGGGA TATAGCGTTC GGCTATGGCA ATCCCATGAG
CTGAACGACT TCACTCCCAG TAATGAAGGA CTATTGATTC TGGTGTCGTC CACCACTGGC
AGTGGTGATT TACCGGAAGA CATCCAGTCC TGGTACTACC GCATCCAATC AACTGCACCC
TATTTACCCG GTCTTCATTA CAGCGTCATT GGCCTTGGGG ATTCCAGCTA CAGCGAGTTT
TGTGGTGCCG GCGAAAAGCT GGATGCACTC TTTACTGAGC TGGGGGCCAA ACGGGTCTTG
CCGCTGCTGC GCATTGATGC AATGGAAACC ATGGAACCGG AATTAGAGGC CAAAACGTGG
CTGACGCAAT GGCACCAGCA AGTTCAGCAC GGCCTGAACG ACTAA
 
Protein sequence
MKHVDLAFGT VYGSAQFVAE TLADELADLG YSVRLWQSHE LNDFTPSNEG LLILVSSTTG 
SGDLPEDIQS WYYRIQSTAP YLPGLHYSVI GLGDSSYSEF CGAGEKLDAL FTELGAKRVL
PLLRIDAMET MEPELEAKTW LTQWHQQVQH GLND