Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1132 |
Symbol | |
ID | 4603384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1381214 |
End bp | 1381678 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639780479 |
Product | flavodoxin |
Protein accession | YP_927009 |
Protein GI | 119774269 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.814005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACACG TTGACCTGGC ATTTGGCACT GTTTATGGCA GCGCGCAGTT TGTGGCTGAA ACCCTGGCAG ATGAACTCGC AGACTTGGGA TATAGCGTTC GGCTATGGCA ATCCCATGAG CTGAACGACT TCACTCCCAG TAATGAAGGA CTATTGATTC TGGTGTCGTC CACCACTGGC AGTGGTGATT TACCGGAAGA CATCCAGTCC TGGTACTACC GCATCCAATC AACTGCACCC TATTTACCCG GTCTTCATTA CAGCGTCATT GGCCTTGGGG ATTCCAGCTA CAGCGAGTTT TGTGGTGCCG GCGAAAAGCT GGATGCACTC TTTACTGAGC TGGGGGCCAA ACGGGTCTTG CCGCTGCTGC GCATTGATGC AATGGAAACC ATGGAACCGG AATTAGAGGC CAAAACGTGG CTGACGCAAT GGCACCAGCA AGTTCAGCAC GGCCTGAACG ACTAA
|
Protein sequence | MKHVDLAFGT VYGSAQFVAE TLADELADLG YSVRLWQSHE LNDFTPSNEG LLILVSSTTG SGDLPEDIQS WYYRIQSTAP YLPGLHYSVI GLGDSSYSEF CGAGEKLDAL FTELGAKRVL PLLRIDAMET MEPELEAKTW LTQWHQQVQH GLND
|
| |