| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1112 |
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| Symbol | |
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| ID | 4603364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1349680 |
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| End bp | 1351293 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639780459 |
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| Product | omega-3 polyunsaturated fatty acid synthase PfaD |
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| Protein accession | YP_926989 |
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| Protein GI | 119774249 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAG CTTTCAAGTG GCCATGGGCC ATAGACCAAG CCTCGGGCAT AAGCCATGTG
GACGCCTTTA AGTCGGCATT GCTTGAGCTG AATAAGCCCC TGTATGTGGC GCGCCTGCCC
GGTGGTGAGC TTTGCCTGAG CCACGATGCT TCTGAGCAAC AACCGGAGCA AGGCCGAGAG
CCCGGGCTGC TGCCGGTGGC CGCTTTTGCC GCCCCCTTTG CCGCCTGTGA GCTTGGCAGT
GAGGATTTTC GCCGCTGCCA CGGGGTAAAA TACGCCTACT ACGCTGGCGC CATGGCCAAT
GGCATCGCCT CCGAAGAGCT GGTAATCGCC CTCGGTAAAG CAGGCATCCT CTGCTCCTTT
GGCGCCGCAG GATTGGTGCC AGCCCGTGTT GAAGCCGCCA TCAAGCGCAT TCAGGCCGAG
CTGCCACAGG GCCCCTACGC CTTTAACCTC ATCCACAGCC CAAGCGAACC TGCGCTGGAG
CAAGGCGCGG TGGAGCTTTA CTTAAAGCAC GGCGTGCACA CGGTAGAAGC CTCAGCCTTT
TTGGCGCTGA CCCCGCACAT AGTGCGCTAC CGCGCCGCAG GCTTAAGCCG CGACAACGAT
GGCAATATCG TCATTAAAAA CAAGGTGATT GCCAAAATCA GCCGCACCGA GGTCGCCAGC
CACTTTATGA AGAGTGCGCC GAAAAAGATG CTCGATACCC TGGTAGCCGA GGGCCATATC
AGCACTGAGC AGGCCGAGCT TGCCTTGCTG GTGCCCATGG CCGATGACAT CACCGCCGAA
GCCGACTCCG GCGGCCACAC CGACAACCGT CCGCTGGTGA CTCTGCTGCC CACCATTCTG
GCGCTGCGTG ACGAGCTGGC AACCAGCCAA TCGTTCGCTA CCCCCATCCG TGTCGGCGCA
GGCGGCGGCA TAGGCACGCC GGATGCGGCC TTGGCCGCCT TTAATATGGG GGCGGATTTT
ATCGTCACCG GCTCCATCAA TCAGGCCTGT ATCGAGGCCG GTGCCAGCGA GCACACCCGT
AAGCTGCTCG CCACCACCGA AATGGCCGAT GTGACCATGG CACCGGCCGC CGACATGTTC
GAGATGGGCG TTAAGCTTCA GGTAGTAAAA CGCGGCACTC TGTTCCCGAT GCGCGCCAAC
AAGCTGTACG AGATTTACAG CCGCTACGAC AGCATCGAAG CCATACCGGC AGATGAGCGC
CAAAAGCTCG AAGCCCAGGT GTTTCGCGCC AGCCTCGATG ACATTTGGCA AGGCACTGTG
GCGCATTTTA TGGAGCGCGA TCCAAGTCAG ATTCAGCGCG CCGAGGGTAA CCCCAAGCGC
AAGATGGCAC TGATTTTCCG CTGGTATCTG GGGCTCTCCA GCCGCTGGTC GAATACCGGC
GAAGCAGGCC GCGAGATGGA TTATCAAATC TGGGCAGGCC CGGCACTCGG CGCCTTTAAC
GGCTGGTCGA AGGGAACTTA CCTTGATGAT TACCGCGAGC GCCGCGCAGT GGACTTGGCG
CTGCATTTGC TCAGCGGGGC AGCGTATTTA CATCGGGTGA ATTCCTTGAA GGCTCAAGGG
ATTGTGTTGC CTTCTGCGGT GGCGCGGTAT CGACCGTTGG AGCCGTTGGC TTAA
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| Protein sequence | MSTAFKWPWA IDQASGISHV DAFKSALLEL NKPLYVARLP GGELCLSHDA SEQQPEQGRE
PGLLPVAAFA APFAACELGS EDFRRCHGVK YAYYAGAMAN GIASEELVIA LGKAGILCSF
GAAGLVPARV EAAIKRIQAE LPQGPYAFNL IHSPSEPALE QGAVELYLKH GVHTVEASAF
LALTPHIVRY RAAGLSRDND GNIVIKNKVI AKISRTEVAS HFMKSAPKKM LDTLVAEGHI
STEQAELALL VPMADDITAE ADSGGHTDNR PLVTLLPTIL ALRDELATSQ SFATPIRVGA
GGGIGTPDAA LAAFNMGADF IVTGSINQAC IEAGASEHTR KLLATTEMAD VTMAPAADMF
EMGVKLQVVK RGTLFPMRAN KLYEIYSRYD SIEAIPADER QKLEAQVFRA SLDDIWQGTV
AHFMERDPSQ IQRAEGNPKR KMALIFRWYL GLSSRWSNTG EAGREMDYQI WAGPALGAFN
GWSKGTYLDD YRERRAVDLA LHLLSGAAYL HRVNSLKAQG IVLPSAVARY RPLEPLA
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