| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1081 |
|---|
| Symbol | |
|---|
| ID | 4603333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1308334 |
|---|
| End bp | 1309698 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639780428 |
|---|
| Product | magnesium transporter, putative |
|---|
| Protein accession | YP_926958 |
|---|
| Protein GI | 119774218 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00154782 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.461647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCAGAAC AGGAACCCAA CCTGGCCCCA CAGAATGAAG TGGGCCTGGT CGTACAACAG
TTAACCGGCG CTGAGGGCCA GGCACAGGCC GAGGTATTCT CAGAAATTCT CGAAGACGCC
GAACCCGGCA CTGTAGCCTT GTTGCTGGAA GCCTTGCCGC TGGATGAGCG TTATGAGCGA
TGGCAGCAGG TGGAGTTCGC CGACAGGGTA GAAGTGCTCA GCCTGATGCG CGCCGATCCG
CGCATGGGCA TCTTGCGGCG TATGCCTGAC GACGAAGTCG ATCTCTTGTT TGCCCAGTTA
AGTCCAGAAG ATCTGATTGA GTGGAGTGAC TATCTTCCCG AGAGCTTTAC CGACAGGGCT
CTGGCGCAAA TGGGCGAGCG CCAGCGTCAG CACTTCGAAC TCTATAATCA ATATTCCGAA
AACGAGATAG GCCGTTATGC CGACCACCAG ATGTTGGTGC TTTCTACCAA GGCAACCATA
GGTCAGGCGC AGCGCTTTTT TCGCAGAATT GAACTCGACT GTAATGACTC GCTGTTTTTG
GTGGACGAAG AAGACCACTT TCGGGGAGCC GTCAGCCGTT ATGAAGTATT TCGCAGTAAT
CCCGATGAGC CACTGCTGAG TCTGATGGAC GAAGACAGTC GTGCCATCAG CGCCGATGCC
ACCCTGATGG AGGCGGCTGA ACTGCTCGAA CATAGCCGAG ACGTTGAGCT GCCAGTGGTG
GACGATGAAG GTGGGCTGAT TGGCCGGGTG ACGTTGAGAA CCGCGACCGA GTTGGTTCGT
GAACATTACG AAGCCCAATT GATGGCAAGC GCCGGTATGA ATGAAACCGA CGACTTGTTC
GCCCCCATTA TGAAAGGCGC ACGGCGCCGC GCCGTTTGGC TGGGTATTAA CCTGCTCACG
GCCTTCCTTG CGTCGGCCAC AATCGGTTTG TTTGAAGACG TGCTGTCGCA GGTGGTTGCC
CTTGCAGTCT TAATGCCTAT CGTAGCCTCC ATGGGGGGTA TTGCCGGCAG TCAGTCGCTG
ACGCTGATGA TCCGCGGCAT GGCGATGGGG CAGATTTCAG CCGGTAACCT CTGGTCTTTG
ATGAAAAACG AACTGGGCAT AGGTGCCGTG AATGGTGTGC TCTGGGCCAT CGTTATAGGC
GCTGTGTCGG GTTGGTGGTT CAGCAATGAA ATCATCGGCA TCGCCATTGG CTGCGCCATT
CTGATCAATA TGCTGGTGGC GGCCGGCGCC GGTGTGCTGG TACCCATGGT GCTGCAAAAA
ATGGATCAGG ACCCAGCGCT ATCCGGCTCG GTGATTTTGA CTACGGTGAC AGATGTGATT
GGGTTTCTCA GTTTTCTTGG CCTTGCGACC ATACTCTTTT TATGA
|
|---|
| Protein sequence | MPEQEPNLAP QNEVGLVVQQ LTGAEGQAQA EVFSEILEDA EPGTVALLLE ALPLDERYER
WQQVEFADRV EVLSLMRADP RMGILRRMPD DEVDLLFAQL SPEDLIEWSD YLPESFTDRA
LAQMGERQRQ HFELYNQYSE NEIGRYADHQ MLVLSTKATI GQAQRFFRRI ELDCNDSLFL
VDEEDHFRGA VSRYEVFRSN PDEPLLSLMD EDSRAISADA TLMEAAELLE HSRDVELPVV
DDEGGLIGRV TLRTATELVR EHYEAQLMAS AGMNETDDLF APIMKGARRR AVWLGINLLT
AFLASATIGL FEDVLSQVVA LAVLMPIVAS MGGIAGSQSL TLMIRGMAMG QISAGNLWSL
MKNELGIGAV NGVLWAIVIG AVSGWWFSNE IIGIAIGCAI LINMLVAAGA GVLVPMVLQK
MDQDPALSGS VILTTVTDVI GFLSFLGLAT ILFL
|
|---|
| |