Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1080 |
Symbol | |
ID | 4603332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1307678 |
End bp | 1308172 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639780427 |
Product | glutathione peroxidase |
Protein accession | YP_926957 |
Protein GI | 119774217 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000852506 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.679739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATC TGTATCAATT TGCCGCCACC ACCATCAAGG GCGAGCAGCA GCCATTGGCC AACTATCGCG GTAAGGTCTT ATTGATAGTC AATACCGCCA GCAAATGTGG CTTTACCCCG CAATATCAAG GGCTGGAAAG CCTCTATCGC AAATACCATG ACCAAGGCCT CGAAATACTC GGCTTTCCCT GCAACCAGTT TGGCGCCCAG GAGCAAGGGA GTGAGTCAGA CATTCAGAGT TTCTGTGAAC TCAATTTTGG TGTGACCTTT CCGCTGTTTG CCAAGGTTGA TGTCAATGGC GAGCAGGCCC ACCCGCTGTT TACTCACCTT AAGCAGGAAG CACCGGGCCT CCTTGGCAGT AAGGCCATCA AATGGAACTT CACCAAGTTT TTGGTCGGCC GTGACGGCAA GGTGAGAGAC AGGTTCGCCC CCACTACCGA TCCCCAAAAG CTGGAAAAGG ATATCGAGGC ACTGCTGAAC GAAGCGGCGA AATAA
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Protein sequence | MTDLYQFAAT TIKGEQQPLA NYRGKVLLIV NTASKCGFTP QYQGLESLYR KYHDQGLEIL GFPCNQFGAQ EQGSESDIQS FCELNFGVTF PLFAKVDVNG EQAHPLFTHL KQEAPGLLGS KAIKWNFTKF LVGRDGKVRD RFAPTTDPQK LEKDIEALLN EAAK
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