| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1077 |
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| Symbol | |
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| ID | 4603329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1304198 |
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| End bp | 1305103 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780424 |
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| Product | collagenase |
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| Protein accession | YP_926954 |
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| Protein GI | 119774214 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000014464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.459952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTGT CACTCCTGTT CTTAAGCCTA CTGTCGGCTG TATGCCATGC CCAAATCCAG
CCCGCCGTGG ATGCCGTACT GACCATAACC CACCAGTGCA GCCCTACCCT GATTATTCGC
GCCCAGGCGC TCGCGCAATC ACAAATAGAC GAAGCCTGTA CCCTGTTAAG TACTCAGGAA
AAGAGGTTTC ATACACTCCT CGATACTCAC AACAGACCGG TGCGGGACGA CAACAATGTG
GCCATGAGAG CCAACATCTA TGCCAACGCA GACGCCTACC GCACCTATGT CACCGCCCAC
TTCGATGTGC CCAGTGACAA TGGCGGCATG TATCTGGAAG GACATCCGGA ACATCCCGGT
AATCAGGCCG AGTTTGTGGC CTATCAAAAA CAGGGAAAAA TCTGGAATCT GCGCCATGAG
TATGTGCACT ATCTCGATGG CCGCTTTAAC CTCTATGGCG ACTTTTGCGC CTCATTGCAC
GACTCCCACA GCGCCCCCGA GTATTGCCCC AAGCCTGCGC CTTTGCTGCC TCATCTGGTG
TGGTGGTCTG AGGGTCTTGC CGAGTATCTG GCCTGGGGGG ATGACAATCC AGCGGCCATT
GAACTGGCCG CAAAGGGCAG CTATCGCCTC AGTGAAATTT TTGACACCAG TTATGAGCAA
AACGGTGGCA GTGAACGGAT TTACCGCTGG GGCTATCTGG CGGTGCGATT TATGATGGAG
CACCACAGAG ACAAGCTGGA ACAGATGCTC GGCTTTACCC GCAACGGCGA TTACCCCCGC
TATCAGGCGT TGGTGCGAGA GTGGCATACC AGCATGGATG GGGAGTTTTC GCTGTGGTTG
AAAAAAATTT CAAAAAAATT GCCAATGGCG GGAACCAATC CCCAGATGGC CGGTCTGAAT
AATTGA
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| Protein sequence | MRLSLLFLSL LSAVCHAQIQ PAVDAVLTIT HQCSPTLIIR AQALAQSQID EACTLLSTQE
KRFHTLLDTH NRPVRDDNNV AMRANIYANA DAYRTYVTAH FDVPSDNGGM YLEGHPEHPG
NQAEFVAYQK QGKIWNLRHE YVHYLDGRFN LYGDFCASLH DSHSAPEYCP KPAPLLPHLV
WWSEGLAEYL AWGDDNPAAI ELAAKGSYRL SEIFDTSYEQ NGGSERIYRW GYLAVRFMME
HHRDKLEQML GFTRNGDYPR YQALVREWHT SMDGEFSLWL KKISKKLPMA GTNPQMAGLN
N
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