| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1068 |
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| Symbol | |
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| ID | 4603320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1294521 |
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| End bp | 1295117 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780415 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_926945 |
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| Protein GI | 119774205 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.425267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGCAA CGCAATCCAT TTCATTGGTG GGTGGTGAGG GCGACGAACT GCTGATGCAG
CGTTATGCCT CCGGGGACAT TCAGGCCTTC GACACCCTTT ATCGTCGCCA CAAAGGCGGG
TTATACCGCT ACTTTTTACG CCAGATTGGT GACAGCCAGC TGGCGGAAGA TCTCTATCAG
GAAACCTGGG GCCGGGTGAT AAAAGCGGCG CCTGCTTACG AAATCAGCGC CAAGTTTACC
ACCTGGCTTT ACCGTATCGC CCATAACCTG CTGATTGACC ATGTGCGGGC TGTTAAACCG
TTGAACGAAG CCGACACCCT GGATGAAGAA GGGATGGCGC TGACAGACTC GATGACTCCG
GTGCGAAGTC ATGAGCACGA CCTTAAGGTG CAGGCCCTGA AACACTGCGT TGGCCTGCTG
CCCCAGGTTC AGAAAGAAGC CTTCCTGCTC TCCAGCGAGA TGGGATTTAC TGCGCTGATG
ATAAGTGAAA TTGCCTCTGT ATCACTGGAA GCGACCAAGA GCCGTATCCG TTATGCCTAT
CAGAGCCTCA AAACCTGCGT GGCCAAGCGA TTGGGGGAGG ATAGCGATGA AAGATAG
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| Protein sequence | MTATQSISLV GGEGDELLMQ RYASGDIQAF DTLYRRHKGG LYRYFLRQIG DSQLAEDLYQ
ETWGRVIKAA PAYEISAKFT TWLYRIAHNL LIDHVRAVKP LNEADTLDEE GMALTDSMTP
VRSHEHDLKV QALKHCVGLL PQVQKEAFLL SSEMGFTALM ISEIASVSLE ATKSRIRYAY
QSLKTCVAKR LGEDSDER
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