| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1067 |
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| Symbol | |
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| ID | 4603319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1292550 |
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| End bp | 1294268 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780414 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_926944 |
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| Protein GI | 119774204 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.773654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACATC GCCATCACCT GACTTCTCTT ATTCCGGCAT TCGCCCTGCG TCAGAGCCTG
CTGGGAGAAC GCTATTCCAG AGCCGAATTA TTGGCTGACT TACTCGCCGG CATTACCGTG
GGCGTTATCG CCATTCCTCT TGCCATGGCA CTCGCCATCG CCAGCGGTGT CGCCCCCCAG
TACGGCCTCT ACACCGCCAT TATCGCGGGT ATCATCATCG CCATCAGTGG CGGTTCGAAG
TTGTCAGTAT CAGGACCAAC CGCCGCCTTT GTGGTGCTGC TCGCCCCAAT CTCGGCGCAA
TATGGTCTCG GTGGTTTGCT GCTGGCGACT GTTATGTCCG GCGTTATCTT ATTGCTGATG
TCCCTGATGC GCCTGGGCAG GCTTATTCAA TATATCCCTG AGCCTGTGAC CCTGGGTTTT
ACCGGCGGTA TCGCCATTGT CATTGCCATG TTGCAGATAA AGGACATGTT TGCCCTGCCT
GTTGAGGCGC TCCCCGAGGA TTTTTGGCAC AAGGTCTCGA CTCTGTTCCA TGCCATGCCC
CACGCCCAGT GGCCCAGCAT ACTGGTGGCG GCAATTACCC TGTCTGTGTT GGTGTTCTGG
CCCAAATTTA CTCAAAAATT GCCGCCCCAT TTGCCTGCGA TCCTCGCGGG CACGCTCTGC
GCTCTGGCAC TCGGCGGCCT TGGGTTTGAC GTAGAGACCA TTGGCTCACG TTTTTCATTC
ACACTGGATG ACGGCACCCT GATGGCGGGG ATCCCGTCGG TGCTGCCATC GTTTCTCTTA
CCCTGGGAGC TTCCGGGCGT GGGAGGCGAG CCATTAACGC TCAATTGGCA ACTCGTTCAG
AATCTGCTGC CCTCGGCCAT GGCCATCGCC ATGCTGGGCG CAATCGAATC CTTGCTCTGC
GCCGTGGTAG TGGATGGTAT GACAGGGAAT CGCCACAGTG CCAACAGTGA GCTCTTTGGC
CAGGGGCTTG GCAATCTTAT CGCACCCTTT TTCGGCGCCA TCCCCGCCAC CGCAGCGATC
GCCCGCAGCG CCGCCAACGT GCGCGCCGGC GCCAAAAGCC CGCTGGCCGC CGTGTTCCAT
GCGCTTACCG TGTTGCTGGC GCTGGTGTTA TTGGCGCCCG TACTGGCCTA TATTCCCATG
GCAACCATGG CCGCGCTGCT GTTGGTGGTG GCATGGCACA TGAGCGAGGC CAAAAAGAGC
CTGCACCTTA TCCGCCGCGC CCATGTGTCG GACGTGGCCG TGCTGCTAAC CTGCCTCATG
CTTACTGTGG CCTTTGATAT GGTGATAGCC ATTGGCGTCG GCATAGTGCT GGCGTCGTTG
CTGCTGATGG GTCAGCTTGC GGCATCAACC CGACTGGTTG CACTGGACTG CGGCAGTGAT
GCCGGCAGCC CCAATATCGA AGCCTTCCGT ATCGATGGCC CGCTGTTTTT TGCCGCCGCC
GATAACCTTT TCAGCGAGCT GATGCACCGA CAGAATGGCG CGCCCATTTT GGTGCTGGAT
TGGCAGAATG TGTCGCTGCT GGACGCAGGT GGCCTGAGTG CACTGGAGCG CACCGTGGCC
TGGGCGCAAA AGCAGGGGCG TGAAATCCGC ATCGTATCTG TACCTTTCCA GGCCCTCAGA
GCCTTGGTCA AGGCCGGCGT TCAGGAGAAG CCCGGCGTAC TGTCCTTCTA TCCGGACATG
ACGGCCGCCT TGCAAGATAC TGTCACAAAT ACGGATTAA
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| Protein sequence | MPHRHHLTSL IPAFALRQSL LGERYSRAEL LADLLAGITV GVIAIPLAMA LAIASGVAPQ
YGLYTAIIAG IIIAISGGSK LSVSGPTAAF VVLLAPISAQ YGLGGLLLAT VMSGVILLLM
SLMRLGRLIQ YIPEPVTLGF TGGIAIVIAM LQIKDMFALP VEALPEDFWH KVSTLFHAMP
HAQWPSILVA AITLSVLVFW PKFTQKLPPH LPAILAGTLC ALALGGLGFD VETIGSRFSF
TLDDGTLMAG IPSVLPSFLL PWELPGVGGE PLTLNWQLVQ NLLPSAMAIA MLGAIESLLC
AVVVDGMTGN RHSANSELFG QGLGNLIAPF FGAIPATAAI ARSAANVRAG AKSPLAAVFH
ALTVLLALVL LAPVLAYIPM ATMAALLLVV AWHMSEAKKS LHLIRRAHVS DVAVLLTCLM
LTVAFDMVIA IGVGIVLASL LLMGQLAAST RLVALDCGSD AGSPNIEAFR IDGPLFFAAA
DNLFSELMHR QNGAPILVLD WQNVSLLDAG GLSALERTVA WAQKQGREIR IVSVPFQALR
ALVKAGVQEK PGVLSFYPDM TAALQDTVTN TD
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