| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1065 |
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| Symbol | |
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| ID | 4603317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1289796 |
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| End bp | 1290938 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780412 |
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| Product | putative membrane-bound dehydrogenase oxidoreductase protein |
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| Protein accession | YP_926942 |
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| Protein GI | 119774202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAG CCAAACTCAG CCACGCCCTT ATTACACTGG CACTCATGCC CTTTGTGGCG
ACCGCTTACA CCAAAGAAGA AAATCAGGCG GTGCTCGATA TGATTAAGCT GCCTGCCGGT
TTTGAGATTG AGGTGCTGCA CCATGGCTTT AAAAACTATC GCCAGATGGC CGTGACTGAG
TCGGGCCTTT TGTATGTGGG CTCCCGCAAA GAAGGTAAGG TGCACTATCT GCCTCTGCCC
GGCTCTGAGG CTGAAAAAGC CGGTGTGCGC GCCGGGCAGC TCTCCATGAA ATTCACCATG
CCTTCGGGCA TTGCGTACCG GGATGGCAAA CTCTATATCG CCGATGTGGG TAACCTGTAC
CGTGTGGATG AGGCTCAAAG CCCGGGCAAG GCCTCACCAA CCCTGATTTA CGACAAATTG
CCCAAGGATT TACACCACGG CTGGAAATAC CTGAAATTCG CTGCGGATGG GCGCCTCTAC
ATCCCCATCG GCGCTCCCTG TAACATCTGT GATGCGGGCA AAGAGTACAG CAAAATCATC
AGCCTGGATT TGGAAACCCT AACCACCAGG GACGAAGCCC TCGGCGTACG TAACAGCGTC
GGCTTCGACT TTGCCCCCAC CACCGGCGAG CTTTGGTTTA CCGACAATGG CCGCGATATG
ATGGGGGACG ATATGCCCTC CGATGAGTTG AATCTGCTCA AAACCCCGGG CCAACACTTC
GGTTACCCCT ATGTGCATCA GGGCGACACC CTGGATCCGG AATTCGGCAC CGGCCACAGC
ATCCAGGACT ATCAAGCGCC AAAGGCCAAA CTCGGCGCCC ATGTGGCCAG TCTCGGCATG
ACCTTCTATA CCGGAAAACA GTTTCCGCAA AAGTATCAGG GTGGCATTTT TATCGCCGAG
CATGGTTCCT GGAACCGCAG TGAAAAAGTC GGCTACCGGG TGCGCTTTGC CAAGCTTAAC
GGCAATGACG TGGAATACCT CGAAACCTTT GCCGAAGGCT GGTTACAGGG GGAAGAAGTC
CATGGCCGCC CCGCCGATGT GATGATGCTG CCAGACGGGA GCTTGCTGGT CAGCGACGAT
GGTCGCGACC GCATTTATCG TATCCGATAT ACAGGCCAGA CGGGCGCTGA TAAAGGTCGC
TGA
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| Protein sequence | MTSAKLSHAL ITLALMPFVA TAYTKEENQA VLDMIKLPAG FEIEVLHHGF KNYRQMAVTE
SGLLYVGSRK EGKVHYLPLP GSEAEKAGVR AGQLSMKFTM PSGIAYRDGK LYIADVGNLY
RVDEAQSPGK ASPTLIYDKL PKDLHHGWKY LKFAADGRLY IPIGAPCNIC DAGKEYSKII
SLDLETLTTR DEALGVRNSV GFDFAPTTGE LWFTDNGRDM MGDDMPSDEL NLLKTPGQHF
GYPYVHQGDT LDPEFGTGHS IQDYQAPKAK LGAHVASLGM TFYTGKQFPQ KYQGGIFIAE
HGSWNRSEKV GYRVRFAKLN GNDVEYLETF AEGWLQGEEV HGRPADVMML PDGSLLVSDD
GRDRIYRIRY TGQTGADKGR
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