Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1061 |
Symbol | |
ID | 4603313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1284363 |
End bp | 1286669 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780408 |
Product | hypothetical protein |
Protein accession | YP_926938 |
Protein GI | 119774198 |
COG category | [S] Function unknown |
COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.964132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.552883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCCAA TCCTCAGGGC AAGCCTGCTT GCCAGCAGCC TGCTATTTTC AATCTTCCCG ACATTCGCCG AAGAACAGCT TGCCCAACAA TTGGTGGATG TTCGCACCCG AGATGGTGTT TCCCAATATT TCAAACGCAC CAATGGGCTG CCTCTGCAGG GGGAATTTTT GCTTACCCGC GAAGATGGCA GCTTTACCCA GGCCGGGTTT GACGCAGGCC TGCCTCACGG CCACTGGCAG ACTTACTATG GTCCATCCCA GCCCATGACC AAGGGGCATT TTATACAGGG TAAGCAACAG GGCGAGTGGC AAACATTCAG CAGCAGCGGC GCCTTGGTGG AGATCCAGCA ATTCGATAAG GGCCTGGCGG AAGGCAACTG GCAGCAGTTC AACGCCAAGG GGGCAGTTGT GGAGCAGCGC CGTTACTCTG CTGGCGATCT GGTACTTGCC GAGCGATTTT TCAGCACCGG ACAAGTGGCT GAAGTGGAGC GCTACCGGCA AAACTTTCGT CACGGTCAGT GGCAACAATT CCATGAAAAC GGCCAACTGG CCATGAATGC CCAGTTTGCC GACAACCTGC CAACGGGAGA GCTTACCCAT TACTATGCGT CCGGTGAGCG CAAGCTACTT GGCCAGTACG ATACCAAGGG GCAACGCACG GGCAAATGGC AGGAATGGGA CAGTCAGGGG CGGCTTAGCC TGGAAACTGA GTACAGCGAA GATACGAAAA ATGGCCTGGA GCAGCACTTC TATCCTGACG GTCAGCCAGA AACCCAGTGC AATTTCCTCG GCGGCCAGCC CCATGGCGAA TGCCAAAGCT TCAGCAGTGA AGGACTGCTC CGGGTAAAAG AGCAGTATTA CAAAGGCAAG CTGGAAGGTG AGCAGCTGTA TTATGACGAC GAAGGCAGCC TGAGGACCAA ACTGCAGTAT CAGGGCGGCA TCAAGGCGGG CATTCAGCAG CGCTTTCACC CCAACGGCCA GTTGGCAGAG CTTGAGACAC TGGCGTCCGA CCGCCCCGCC GACAATGGCC AGTATCCGCT GCATGGCAAG CAGGAAAGTT ATAACAGTGA CGGGCAGCTG CAACAATCCA GTGGCTACCA GCGTGGCCTT CGCGAGGGTG AGTTTTTGCG CTTTCAGGGG GATACCCTTG TTGAATCGAG CCATTGGTTA CAAGGCGTTC GCCACGGCGA TGTACGCACC TTTTATCCGT CAGGCAAACC CAAGGCATTT GATCAGTATG TAAATGGCAC ACTCGAGGGT ATATCGGAGC GCTACTACGA CGATGGCAAA CTCCAGGCCA GAGGCGAAAT GCGCAATGGA CTCTGGGTGG GCCGCTATGA AAGCTTTTAC CGGGACGGCA CACCTCAGGA GCTCAAACAT TTCGCCAAAA AAAAGCCAGC CAATGCCAAC CAGTACCCAC TGGAAGGCGA GTACAGCCGC TGGTATGCCA ATGGCGACCT GAACGAGACA GGCCTCTATG AACAGGGCAA GAAAACCGGC CTGTGGCGCC AATATCAACA GGGACTGATA AGCAGCGAGC AGGAATATCT AACCGATAAG CTAAACGGTA AGTACACCCA ATATTATGAA GGCCGCCAGC GCACCAGTGG CCAGTACAGG GACAACCAAA AAGAAGGTCA ATGGATTGAG TATCGCTACG AAGAGAAAGA CCCCACCTTT GGCCCAATCC CCGAAGGCAA TGTCTACAGC AAGACCCAAT ACCATGCCGG GAAGCGCCAT GGCAAAGAAG AGCTCTTCTC TTTCAGTGGG GTACGTTATC GCCTGACCAC CTTCGACATG GGCGCCAAAA CCGGTGACTA TCAAACCTTT TTCGTCACTA ATGGCCAACT GGAACAAAGT GGCAAGCTCA TCAAGGGCAA TAAAACCGGG CAGTGGCAAT CCTGGTATGA AAATGGCCTG CCCAAATGGG TTGCAACCTA TGAGGATGAC AAGCTCAACG GCCCTCGCAA GACTTTCTAC GACGACGGTC AGACCAAGTC CGAGGGCGAT TATCAGCATG ACCAGCCAAG CGGTAACCAC AAAGAGTACT ATCCAACAGG CGCCCTCAAA GCGGAGGAGT CATGGCTCAA CGGGCGCCGT GAAGGTGAAG CCCGTTATTT CCACCCCAAT GGCAAACTCT CAGAGCGGGG CAGCTTTATC AAAGACAGGA AAGAAGGCCT GTGGCTGAGC TTTTGGCCTG GTGGCGAGAA ACGTATTGAG GGCAGCTATA TTGCCGACCG ACAATCCGGA GACTGGCAGT TCTTCGATCA GTTCGGCAAG CTGATTAAAA CCGAGCATCA CAACTGA
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Protein sequence | MYPILRASLL ASSLLFSIFP TFAEEQLAQQ LVDVRTRDGV SQYFKRTNGL PLQGEFLLTR EDGSFTQAGF DAGLPHGHWQ TYYGPSQPMT KGHFIQGKQQ GEWQTFSSSG ALVEIQQFDK GLAEGNWQQF NAKGAVVEQR RYSAGDLVLA ERFFSTGQVA EVERYRQNFR HGQWQQFHEN GQLAMNAQFA DNLPTGELTH YYASGERKLL GQYDTKGQRT GKWQEWDSQG RLSLETEYSE DTKNGLEQHF YPDGQPETQC NFLGGQPHGE CQSFSSEGLL RVKEQYYKGK LEGEQLYYDD EGSLRTKLQY QGGIKAGIQQ RFHPNGQLAE LETLASDRPA DNGQYPLHGK QESYNSDGQL QQSSGYQRGL REGEFLRFQG DTLVESSHWL QGVRHGDVRT FYPSGKPKAF DQYVNGTLEG ISERYYDDGK LQARGEMRNG LWVGRYESFY RDGTPQELKH FAKKKPANAN QYPLEGEYSR WYANGDLNET GLYEQGKKTG LWRQYQQGLI SSEQEYLTDK LNGKYTQYYE GRQRTSGQYR DNQKEGQWIE YRYEEKDPTF GPIPEGNVYS KTQYHAGKRH GKEELFSFSG VRYRLTTFDM GAKTGDYQTF FVTNGQLEQS GKLIKGNKTG QWQSWYENGL PKWVATYEDD KLNGPRKTFY DDGQTKSEGD YQHDQPSGNH KEYYPTGALK AEESWLNGRR EGEARYFHPN GKLSERGSFI KDRKEGLWLS FWPGGEKRIE GSYIADRQSG DWQFFDQFGK LIKTEHHN
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