| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1058 |
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| Symbol | |
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| ID | 4603310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1281529 |
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| End bp | 1283109 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780405 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_926935 |
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| Protein GI | 119774195 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.512666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAGCAT TCAATGACAG ACTCGGGGCT CTCTCCGATG CAGAAGGACG CAAGGCACTT
GCCGGGCTGC GACGGGGTTT GGAGCGTGAG GCTTTGCGTA TCACCAGCTG TTGCCAGCTG
GCCCTGGATC CCCATCCCAA AGCGCTTGGG TCGGCGCTGA CCCACTCCAG GATCACCACT
GATTACAGTG AGGCCTTGCT GGAGTTTATT ACCCCGGTCA GTGGCAACAT TGAAGACTTG
CTGGAAGGCC TGACTGAAAC CCACGCCTAT ACCCTGAAAC ATTTGGATGG CCAGAAGCTG
TGGCCGGTGA GCATGCCCTG CTATGTTGGC GATGTGAAAG ACATACCCAT TGCCCAATAT
GGCACCTCCA ATACCGGCAG GATGAAAACC CTCTATCGCA AGGGGCTGAC CTACAGATAC
GGCGCCCTGA TGCAGATTAT TTCCGGGGTG CATTTTAACT TTTCGCTCTC CAGCGACTTG
TGGCCAAGAT TGCATGCACT CTCGGGCAGC AGCCTGTCGC TGGACGAGTT TATCTCCGAA
TCTTACTTTG GCCTTATCCG CAATTACCGC CGCCTGGTAT GGGTATTGCC TTACCTTTTT
GGCGCGTCAC CGGCGATTTG TGGCTCTTTC CTCAAAGGCC AGAAAACCAG TCTCGAGTTT
GAAAAAACAG CTGGCGGCAC CCTGTATCTG CCGTACGCGA CCTCGCTGAG AATGAGTGAC
CTTGGCTACA CCAACAAAGA GCAGGCCAGC CTTAACATCA GCTATGACTC TCTGCATGAT
TATTTGCAGG GGATCCGTGA GGCGATTTGC TTGCCATCGG CCAAGTTTGC CGAAATTGGC
GTGAAAGTGG ATGGTGAATA TCGCCAGCTC AATGCCAATG TGCTCCAGAT TGAAAACGAA
TTTTACGCCC CCATTCGAGC CAAGCGGGTG ACCCGCAAGG GTGAAAAGCC ATCTGAGGCG
CTGGCTCGTG CCGGGGTTGA GTACATTGAA GTGCGGGCGC TGGACGTAAA TCCCTTCAGC
CCGGTTGGGG TTGAAGCATC ACAGCTGCGT TTCCTGGATG TCTTCCTGCT TTATTGCCTG
TTGTCGGATT CGCCAAAGAG CGACGCGGTC TGTGAATCTG AAATCACGTC CAACCTCAGA
GCCGTTATCC ATGAAGGGCG CAAACCCGGA CTGGCACTCA GTCGTCAGGG CGAGCCTGTG
ACACTGAAAG CCTGGCTGCT GGAACTCTTC GATGAGTTTG ATAAGCTCGC CAGTCTGCTG
GACATAGACG GCAGCGACTA TGCCGAAGCG CTGGCGCAAT GGCGCATGGC CGTTGAAGAC
CCCGCCCTGA CGCTTTCTGG CAGGGTACAT GCCGCGGTTG TGGAGCAGGG CATGAATCAT
GGCGATTTCG TGATGGGACT GGCGGCCAAA TATCAGGATT TCTTCCTGTC GTATCCGCTG
TCTCCCGGCG TGGAAGCGGG TTTCCAGGCC GAGGCGGCAT CCTCCCTTGC CGCACAGGCC
GAGATTGAAG CCAGTGATGA AGAAAGCTTT GATGAGTATC TCAAGGGCTA CTTCAAAGGT
GTGCCATGCG CGCTGTCCTG A
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| Protein sequence | MTAFNDRLGA LSDAEGRKAL AGLRRGLERE ALRITSCCQL ALDPHPKALG SALTHSRITT
DYSEALLEFI TPVSGNIEDL LEGLTETHAY TLKHLDGQKL WPVSMPCYVG DVKDIPIAQY
GTSNTGRMKT LYRKGLTYRY GALMQIISGV HFNFSLSSDL WPRLHALSGS SLSLDEFISE
SYFGLIRNYR RLVWVLPYLF GASPAICGSF LKGQKTSLEF EKTAGGTLYL PYATSLRMSD
LGYTNKEQAS LNISYDSLHD YLQGIREAIC LPSAKFAEIG VKVDGEYRQL NANVLQIENE
FYAPIRAKRV TRKGEKPSEA LARAGVEYIE VRALDVNPFS PVGVEASQLR FLDVFLLYCL
LSDSPKSDAV CESEITSNLR AVIHEGRKPG LALSRQGEPV TLKAWLLELF DEFDKLASLL
DIDGSDYAEA LAQWRMAVED PALTLSGRVH AAVVEQGMNH GDFVMGLAAK YQDFFLSYPL
SPGVEAGFQA EAASSLAAQA EIEASDEESF DEYLKGYFKG VPCALS
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