| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1057 |
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| Symbol | |
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| ID | 4603309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1278505 |
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| End bp | 1281342 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780404 |
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| Product | M16 family peptidase |
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| Protein accession | YP_926934 |
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| Protein GI | 119774194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.867585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT GGATTCTGGC TGCCGCCATT TCGGCAGCAC TCGCGGGCTG CGCCCAGCAC
TCTTCTGACT CTCTGGCACT GCCGGAAGGG GTCACCCTGG TTGAGATTGT TGCCGCAGAC
AGTGCTGGCG TTGGTATTCC TTACAAGAAG TTCCAGTTGG CCAATGGTCT GACAGTGATA
CTGCACCAGG ACAGCTCAGA TCCTCTGGTG CACGTCGATG TGACCTATCA CGTGGGCTCG
GGCCGGGAGT TGCCCGGTCG CAGCGGTTTT GCTCACCTGT TTGAACATAT GATGTTCCAG
GGCTCAGAAA ACGTCGCCGA TGAGCAGCAC TTTAAGGTGG TCACAGAGTC CGGCGGTACC
CTGAACGGCA CCACGAACAC CGACCGCACC AATTATTTTG AGACAGTGCC CAGTAACCAG
CTGGAAAAAA TGCTGTGGCT CGAGTCTGAC CGCATGGGCT TTTTCTTGCC TGCGCTTACC
GAAGAAAAAT TTGAGGTTCA GCGCGAAACC GTGAAAAACG AGCGTGCCCA GCGTATCGAT
AACCAGCCCT ATGGCCGTAT GTACGAGCGC TTCAGCCAGG CCATGTATCC CGCCGGTCAT
CCATACTCCT GGCCTGTGAT TGGCTGGCCG GAGGATTTGA ACCGTGCCGA GCTTGCGGAT
GTGAAGCAAT TCTTCCAGCG CTGGTATGGT CCCAACAATG CCACCCTGAC CATTGGTGGC
GATTTTGACG AGCTGCAGAC TCTGGCCTGG GTGAACAAGT ATTTTGGTGA TATTCCGCGC
GGTCCGGAAG TTGAGGCACT GCCCAAAAAC CAGGTAACCC TGGATAAGGA CAGATACCTG
TCCATGGAAG ACAAGGTACA CCTGCCGCTC ATCCGTATGG CGCTGCCCAC TGTGTATGCC
AGCCATCAGG ATGAAGCCGC ACTGGATTTA CTCGCCAACA TTCTTGGCGG TGGCAAAACG
TCGCTGGTGT ACAAAAACCT GGTCAAGGAA GGCTATGCGG TGCAGGCCAG CGCCAGCCAC
CCTTGCCGCG AGCTGTCCTG TGAGATGTCG TTTTTTGCCC TGGCCAATCC CGCCAAGGGC
GGCAGTCTCA AAGAGCTTGA AGGCAAAGTT CGTGCGTCCA TTGCCGAGTT TGAGCGCCGT
GGCGTAACCG ATGAAGATCT GGAAAAGGTG AAGGTGCAAT TTGAGGCCGA TACCATCTTT
GGTCTGCAGA GCGTTCGCGG CAAGGTATCC GCGCTGGCCG CCAACGAGAC CTTCTATGGC
AACCCCAATA TGATTGCCAA AGATTTGCAG CGCTATGCCA GTGTGACCAA AGCCGATGTT
ATTCGCGTAT TCAATCAATA CGTGAAAGAC AAGCCCATGG TCATCATGAG CGTGGTGCCT
GAAGGTGCCA AAGCTCTGGT GGCAGCGGCC GACAACTTTA CTGCTCCGGC GCCGCTGTTA
GCTGCCAACG CGGTTGCCGG TGAGCTGAAA GTCAGTGAGG CCAAGTCGTC CTTTGACCGC
AGTGTTATGC CACAAAGTGG TAAAGCACCG GTACTTAAAG TGCCTACTCT GTGGCGCGAC
ACCTTGGGCA ATGGAATTGC CGTGCTCGGT ACCCAGAGTG CCGAAACCCC CACCACGGAA
ATCGTAATTT ACCTGGCTGG CGGCCATCGC CTGGCCGACG TCAGCAAGGC CGGTGTGGCT
CAGCTCACCG CCGCTATGCT CAATGAGTCA ACCAGCCAAC GCTCCAGTGA GGAACTGACC
CAGGCCCTCG AACTCCTGGG GGCCTCGGTG CAGTTTTCTG CCAGCGATTA TCAGAGTGAA
ATCAAGCTGT CAGCACTGAC AGAAAAGCTG GATGACACTC TCGCCGTGCT GAAAGAAAAG
CTGCTGATGC CGGGCTTCAA GGCGGAAGAC TTCGAGCGGG TGAAACAGCA AACCCTGCAG
GGGCTTAAAC ATTCTCAGTC CAACCCCAAC TATCTGGCAA GCACAGGTTT TGCCAAGCTG
CTGTACGGCG ATAACAATGC CCTGGGCGTG GATGCAACTG GTACCGTAGA CACTGTTGCC
GCCCTGACGC TGGACGACAT CAAGGCTTTC TACCAGACAC AGTACAAGGC CGGTAATGCC
CAGATGGTGG CGGTATCCAG CGCGCCTAAA GCGGCACTGC TCTCTTCGCT CAAGACACTC
GACAGCTGGC AAGGTGAAGC CACCGCCATG CCTGCGCTTG GACAACTGCC AGGCTTAAGC
GGTGGCACCA TTTATGTGCT GGACAAACCC GCCGCGGCCC AGTCGGTAAT TTCCATTGGT
AAGCTTGCGC TGCCTTTTGA TGCCATCGGT GAGTACTTTA AAGCCGGTTT GATGAACTAC
CCGCTGGGCG GCGCTTTCAA CAGCCGTATT AACCTGAATC TGCGTGAAGA TAAGGGTTAC
ACCTACGGCG CCCGCAGTCG TTTCAGCGGC GGCAGCGAAG TGGGTCAGTT CCTGGCGACT
GCCAGTGTGC GCAGCGATGT GACGGCAGCT GCGGTATCTG AGTTCATCAA AGAAATCACC
ACCTATAACG CCACCGGTAT CCGTGACGAT GAGCTGAACT TCATGCGCAA CTCCATCTCC
CAGGGCCAGG CACTGGATTA TGAAACCCCA TACCAGAAAG CCGGCTTTAT GCGGATGATC
CAGCGTTATA ATCTCAATGA TCGCTTTACC GCCGAGCAGG ATAAAATTAT CGCGGGTATT
CAAAAAGATG AAATCGACGC TCTTGCCAAG AAACATCTGA ATATCAATGA GATGGTTATC
TTTGTGGTGG GTGATAAGGC CAGCATATTG CCTGAACTCG AGGCGCTCGG GTATCCGGTG
AAAGACTTGG TATTGTAA
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| Protein sequence | MKKWILAAAI SAALAGCAQH SSDSLALPEG VTLVEIVAAD SAGVGIPYKK FQLANGLTVI
LHQDSSDPLV HVDVTYHVGS GRELPGRSGF AHLFEHMMFQ GSENVADEQH FKVVTESGGT
LNGTTNTDRT NYFETVPSNQ LEKMLWLESD RMGFFLPALT EEKFEVQRET VKNERAQRID
NQPYGRMYER FSQAMYPAGH PYSWPVIGWP EDLNRAELAD VKQFFQRWYG PNNATLTIGG
DFDELQTLAW VNKYFGDIPR GPEVEALPKN QVTLDKDRYL SMEDKVHLPL IRMALPTVYA
SHQDEAALDL LANILGGGKT SLVYKNLVKE GYAVQASASH PCRELSCEMS FFALANPAKG
GSLKELEGKV RASIAEFERR GVTDEDLEKV KVQFEADTIF GLQSVRGKVS ALAANETFYG
NPNMIAKDLQ RYASVTKADV IRVFNQYVKD KPMVIMSVVP EGAKALVAAA DNFTAPAPLL
AANAVAGELK VSEAKSSFDR SVMPQSGKAP VLKVPTLWRD TLGNGIAVLG TQSAETPTTE
IVIYLAGGHR LADVSKAGVA QLTAAMLNES TSQRSSEELT QALELLGASV QFSASDYQSE
IKLSALTEKL DDTLAVLKEK LLMPGFKAED FERVKQQTLQ GLKHSQSNPN YLASTGFAKL
LYGDNNALGV DATGTVDTVA ALTLDDIKAF YQTQYKAGNA QMVAVSSAPK AALLSSLKTL
DSWQGEATAM PALGQLPGLS GGTIYVLDKP AAAQSVISIG KLALPFDAIG EYFKAGLMNY
PLGGAFNSRI NLNLREDKGY TYGARSRFSG GSEVGQFLAT ASVRSDVTAA AVSEFIKEIT
TYNATGIRDD ELNFMRNSIS QGQALDYETP YQKAGFMRMI QRYNLNDRFT AEQDKIIAGI
QKDEIDALAK KHLNINEMVI FVVGDKASIL PELEALGYPV KDLVL
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