| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1055 |
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| Symbol | |
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| ID | 4603307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1276475 |
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| End bp | 1277728 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780402 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_926932 |
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| Protein GI | 119774192 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.637343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATTC AAACATTAAA TAAAATTCCC TTCTGGCAGA AAGTGCTGGC TGGTTTTGCC
CTGGGGATAC TCACAGGGGT ACTGCTGGGC GAATCGGCCA CTGTGCTCAA GCCCCTTGGC
GATCTCTTTA TTGCCGCTAT CAAGATGCTG GTTGCACCAC TGGTCCTGTG CGCCATCGTG
GTCAGTATCA CCTCCCTGGG CAGCTCATCC AACCTTAAGC GCCTGAGCTT CAAGACACTG
GCGCTCTTCA TGCTGACCGG TACCCTTGCC TCGTTGATTG GTCTGGCAGT CGGCAGCAGC
TTCGATATGG GCGGCAGCAT GCAACTGGCC AGTACCGAAG TGCGCGAACG CGTTGTACCG
GGCTTTGCTC AGGTGCTGCT GGATATGATC CCGGTGAACC CCTTTGCCTC GCTGACCAAC
GGCAAAGTAC TGCAAATCAT TGTATTTGCG GCCTTGGTGG GTATTGCCAT CAACGCTGTG
GGCGAGAAAG CCGAGCCTCT GAAAAAGGTA TTTGATGCCG GAGCCGAGGT GATGTTCCAG
CTGACCCGTA TGGTGCTGAA ACTCACTCCA ATCGGTGTAT TTGGCCTGAT GGCTTGGGTG
GTGGGCGAAT ATGGCCTCTC AACCCTGCTG CCGCTGGGTA AATTTATTAT CGCCATCTAC
GTGGCAGCGC TTATCCACAT AGTGTTTGTC TACGGCGGCC TGGTGAAGTT TGCTGCCCGC
TTAAGCCCTC TGCAGTTTTT CCGTAAGGCA ATGCCAGCGC AGCTGGTTGC CTTTAGCACG
GCGTCGAGCT TTGGCACCCT GCCGGTCACC ACCAAGTGTG CCGAGTCCAT GGGTGTTTCC
AAGCGTTACA GTGCGTTTGT GCTGCCCATG GGCGCCACCA TGAACATGGA TGGCTGTGGT
GGTATTTATC CTGCCATTGC GGCCATTTTC ATCGCGCAAA TCTACGGAAT TCCGCTGGAT
ATGACCGACT ATATGCTGAT TGCCGTTACC GCGACCGTGG CCTCAGTGGG CACCGCCGGC
GTACCAGGCA GCGCCATGGT GATGCTTACC GTCACCCTGG GAGTGGTTGG TTTACCGCTG
GAAGGTATTG CCTTTATCGC GGCCATTGAC CGGGTGATTG ATATGATACG GACCTGCACC
AACGTTACCG GCGATATGAT GACCGCCGTA GTGGTGGGCA ATTCCGAGGG TGAGCTGGAC
CGCGAGCGAT TTTATAAGGC GGAAGAAGAT AAAATCGTCG CAGACAACGC CTGA
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| Protein sequence | MIIQTLNKIP FWQKVLAGFA LGILTGVLLG ESATVLKPLG DLFIAAIKML VAPLVLCAIV
VSITSLGSSS NLKRLSFKTL ALFMLTGTLA SLIGLAVGSS FDMGGSMQLA STEVRERVVP
GFAQVLLDMI PVNPFASLTN GKVLQIIVFA ALVGIAINAV GEKAEPLKKV FDAGAEVMFQ
LTRMVLKLTP IGVFGLMAWV VGEYGLSTLL PLGKFIIAIY VAALIHIVFV YGGLVKFAAR
LSPLQFFRKA MPAQLVAFST ASSFGTLPVT TKCAESMGVS KRYSAFVLPM GATMNMDGCG
GIYPAIAAIF IAQIYGIPLD MTDYMLIAVT ATVASVGTAG VPGSAMVMLT VTLGVVGLPL
EGIAFIAAID RVIDMIRTCT NVTGDMMTAV VVGNSEGELD RERFYKAEED KIVADNA
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