| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1050 |
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| Symbol | |
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| ID | 4603302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1271214 |
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| End bp | 1271408 |
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| Gene Length | 195 bp |
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| Protein Length | 64 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639780389 |
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| Product | carbon storage regulator |
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| Protein accession | YP_926927 |
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| Protein GI | 119774187 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
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| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000586166 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.521408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGATTT TGACACGTCG TGTTGGCGAA ACACTGATGA TCGGTGACGA AGTCACGGTG
ACAGTGCTGG GTGTAAAGGG AAATCAGGTG CGCATCGGTG TGAATGCACC TAAAGAAGTG
TCTGTTCACC GCGAAGAGAT TTACCAGCGT ATTCAATCTG AAAAAACAGG TTCGCCCGAG
GGCGGTAACT ACTGA
|
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| Protein sequence | MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQSEKTGSPE
GGNY
|
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| |