| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1049 |
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| Symbol | |
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| ID | 4603301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1269889 |
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| End bp | 1271100 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780388 |
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| Product | aspartate kinase |
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| Protein accession | YP_926926 |
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| Protein GI | 119774186 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00683315 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.60962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAAAAA TTTATGTAAA GAAGTTCGGA GGCACCTCTG TGGGTACCTT CGAACGCATT
GAGGCGGTGG CAGATGCCAT CGCCAAAGCG CATTTTGAAG GTGAGAGGCA GGTGTTGGTG
CTCTCGGCTA TGGCCGGCGA AACCAACAGG CTTTATGCCA TGGCCGCCAA CATAGACCCT
CTGGCACCTG CCCGGGAATT GGACATGTTG GTGAGTGCAG GTGAGCAGGT CAGTATTGCC
CTGATGTCTA TCGCGCTGGC AAGACGGGGC GTTAATGCCA GGTCTTTGCT GGGTAGCCAG
GTCAAGGTGC GCACTAACAG CCAGTTTGGC AGAGCCAGTA TTGAGTCCGT TGACACAGGG
TTATTGATGC AGTTGCTGGA CGAAGGCGCT GTACCTGTTA TCGCCGGGTT TCAAGGCGTC
AACGAGCAGG GCGATGTGAC AACTCTTGGG AGGGGTGGCT CAGATACCAC TGCCGTTGCC
ATTGCCGCCG CACTTGAGGC GGCTGAGTGT CAAATCTTTA CTGATGTGAC CGGCGTTTTT
ACCACAGATC CCAATATAGA TCCCGATGCC CAGAAACTCG ATAGCATCAG TTTCGAAGCC
ATGTATGAAA TGGCAAGGCA GGGCGCTAAG GTATTGCATC CCGACAGCGT TGCCTGTGCA
CGCCGTCATG GCGTGGTGCT TAGGGTGTTG TCGAGTTTTG AGTCCGGCAG TGGCACCCTT
ATCCGCTTCG ATGAGCCAGA GCACTCCGGC TCGGGCATTG TGGGCATTGC CGTTACCCGT
GGACAAGGCC TGGTCTCTGT TGCCGGTTTG GTGGATCAGC CGCAGGCGGA AGTAGCCCTG
TTTCAGGCGC TGGCAAACGC CTCTGTGGAT ACTGACCTGG TGGTACAGCT GGCGGAAGAA
AAGGCACTGG CATTTACCCT GGCGCAAGGT GCACTCGATA AGGTGTTGAC CCTGATAGAC
AGGTTGGCGC TTGAGCAGCC TCTGGCGGAC GTTCGCCATG AGTCGCCATT GGCCAAGGTG
TCCCTCGTCA GCACCGGTAA AGCAGTCATG GCTGAAGTGG GGGCTCGTGT TACCGAGCTT
TTGGAAGCAC AAAACATTCG TGTTAAGTTA CTTTCGACAT CAGAAATCAA ACTGTCGGTG
GTAATCGATG AGGTGCATCT GCAGCATGCC GTCAGAAGTT TGCACAGAGC GTTTGACCTC
AATAAAGTAT GA
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| Protein sequence | MTKIYVKKFG GTSVGTFERI EAVADAIAKA HFEGERQVLV LSAMAGETNR LYAMAANIDP
LAPARELDML VSAGEQVSIA LMSIALARRG VNARSLLGSQ VKVRTNSQFG RASIESVDTG
LLMQLLDEGA VPVIAGFQGV NEQGDVTTLG RGGSDTTAVA IAAALEAAEC QIFTDVTGVF
TTDPNIDPDA QKLDSISFEA MYEMARQGAK VLHPDSVACA RRHGVVLRVL SSFESGSGTL
IRFDEPEHSG SGIVGIAVTR GQGLVSVAGL VDQPQAEVAL FQALANASVD TDLVVQLAEE
KALAFTLAQG ALDKVLTLID RLALEQPLAD VRHESPLAKV SLVSTGKAVM AEVGARVTEL
LEAQNIRVKL LSTSEIKLSV VIDEVHLQHA VRSLHRAFDL NKV
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