Gene Sama_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1036 
Symboleno 
ID4603288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1255111 
End bp1256406 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content55% 
IMG OID639780375 
Productphosphopyruvate hydratase 
Protein accessionYP_926913 
Protein GI119774173 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA TTATCAAAGT GATCGGTCGT GAAATCATGG ATTCACGCGG CAACCCAACC 
GTAGAAGCCG AAGTACACCT GGAAGGTGGC TTTGTGGGCA TGGCAGCTGC GCCATCCGGT
GCTTCTACCG GTAGCCGCGA AGCGCTGGAA CTGCGTGACG GCGACAAGGC CCGTTACCTG
GGTAAAGGCG TGCTGAAGGC CGTTGACAAC GTAAATGGTC CTATCCGTGA AGCCCTGCTG
GGTAAAGATG CCACCGCTCA GGCTGAGCTG GACGGCATCA TGATCGCTCT GGACGGTACC
GAGAACAAAG ACAAGCTGGG TGCCAACGCC ATTCTGGCTG TGTCTCTGGC TGCCGCCAAG
GCCGCTGCCG CCGCTAAAGG TATTCCACTT TACGCTCACA TCGCTGAGCT GAACGGTACC
CCAGGCCAGT ACAGCATGCC TGTACCCATG ATGAACATCC TTAACGGTGG TGAGCACGCT
GACAACAACG TGGACATCCA GGAGTTCATG GTACAGCCAG TGAGCGCCAA GAGCTTCCGT
GAAGCCCTGC GTATGGGCGC CGAAATCTTC CACAACCTGA AGAAAGTGCT GAAGGCAAAG
GGTCTGAACA CTGCTGTGGG TGACGAAGGT GGTTTCGCGC CAAACCTGGC CTCCAACGCC
GATGCACTGG CTGTTATCAA AGAGGCTGTT GAAGCCGCTG GTTATAAGCT GGGCACCGAC
GTGACTCTGG CTCTGGACTG CGCCGCCTCT GAATTCTACA AAGACGGTCA GTACGACCTG
TCTGGCGAAG GCAAAGTATT CAGCTCAAAC GGTTTCTCTG ACTTCCTCAA GTCACTGACC
GAGCAGTATC CAATCGTGTC TATCGAAGAC GGTCTGGACG AGTCTGATTG GGAAGGTTGG
GCATACCAGA CCCAAATTCT TGGCGACAAG GTACAGCTGG TAGGTGACGA CCTGTTTGTA
ACCAACACCA AGATCCTGAG CCGCGGTATT GAGCAGGGCA TTGCCAACTC AATCCTCATC
AAGTTCAACC AGATTGGTTC TCTGACCGAA ACTCTGGCTG CTATCCGCAT GGCTAAAGAA
GCCGGTTACA CCGCCGTTAT CTCTCACCGC TCCGGCGAAA CCGAAGATGC GACCATTGCC
GATCTGGCCG TAGGTACCGC TGCTGGTCAA ATCAAGACTG GCTCTCTGTG CCGCTCTGAC
CGTGTTGCCA AGTACAACCA GCTGCTGCGT ATCGAAGAGC AACTGGGTGA GAAAGCGCCA
TACCGCGGTC TGACTGAAAT CAATGCCAAG GGCTAA
 
Protein sequence
MAKIIKVIGR EIMDSRGNPT VEAEVHLEGG FVGMAAAPSG ASTGSREALE LRDGDKARYL 
GKGVLKAVDN VNGPIREALL GKDATAQAEL DGIMIALDGT ENKDKLGANA ILAVSLAAAK
AAAAAKGIPL YAHIAELNGT PGQYSMPVPM MNILNGGEHA DNNVDIQEFM VQPVSAKSFR
EALRMGAEIF HNLKKVLKAK GLNTAVGDEG GFAPNLASNA DALAVIKEAV EAAGYKLGTD
VTLALDCAAS EFYKDGQYDL SGEGKVFSSN GFSDFLKSLT EQYPIVSIED GLDESDWEGW
AYQTQILGDK VQLVGDDLFV TNTKILSRGI EQGIANSILI KFNQIGSLTE TLAAIRMAKE
AGYTAVISHR SGETEDATIA DLAVGTAAGQ IKTGSLCRSD RVAKYNQLLR IEEQLGEKAP
YRGLTEINAK G