| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1031 |
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| Symbol | |
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| ID | 4603283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1245628 |
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| End bp | 1248453 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780370 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_926908 |
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| Protein GI | 119774168 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.581247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG CGCACAATAT GACAAAATAC AGTCTGCGGT CCTGGGTATT GGTGTTGGCG
CTAGCGCCCA CTATCCTCGT TGGAATCCTT TTGGGCAGTT ACTTTACCAT AAACCGCTTC
TATGATCTTG AAGACACACT CAAGGATATG GGCAGTAACA TCATAGAACC CCTGGCCATT
TCTGCAGAAC AGAGCCTGTC GACCAATAAC CGCGAAATCA CCAAAATCCT GCTGGCCCGA
GCCCAACTCA ACAAATCGAC ACTGGTCAAG TCCATCGCCA TTTTTGACAT TAACAATCAG
TTATTTGTCA CTTCGCACTA TCACAAAGAC TTTGAGGTGA TGCGTTATAA GGAAGCGCTG
GAGTCTCTGA AAGAAACTCA ATTCGAACAT GAAGGAGACA CCCTGATTGT TCGCACCCCC
ATCTTTGCCA TCAGCAGCAA GCAGCCCATG GGTGACAACA TTGACGAAGG CAGTGGCCGC
TTCAGTGAAG CCGTCGTGAT GCCCGACAAC TCCAATGCCG CGCTGCTTGG CTATGTTTCC
ATGATGCTGA ACAAGGAAAA GGCGCTGCTT GAGCAGCACC GGGCTGCTGT GGCCGCCTTT
ATTATCGTGC TGATTGGCGT GCAGTTAAAC CTGCTGTTTA CCTTCCGCTT GGTCAAAAAC
GTGACCCAGC CCATCACCGA CATGGTGAAA CTGGTAGGCA AAATCCGTGA AGGCAAACTG
GATGCGCGGC TTGAAGGCAA CCTCATCGGG GAACTGGATC TGCTCAATCG GGGTATCAAT
GCCATGGCAG CGTCGCTGTC GGAATATCAC GATGAAATGC AGCAAAACAT CGACCAGGCG
ACCTCTGATC TTCGCGAAAC CCTGGAGCAG ATTGAAATAC AGAACATAGC GCTCGACAGG
GCCAAGAAAG ACGCTCAGGA AGCGAGCCGC ATCAAATCTG AGTTTTTGGC CAACATGTCC
CATGAACTCA GAACACCGCT CAACGGCGTG ATTGGTTTTG CCAGACAACT CCTCAAAACC
CCGCTGCATT CCAGCCAGAT GGAATACATC AAAACCATCG AGCGCAGTGC CACCAGTTTG
CTGCAGATAA TCAACGACAT CCTCGACTTT TCCAAGCTTG AAGCCAACAA GATGGTGCTG
GAGACCATGC CCTTTGGCCT GCGCGCGTCA CTGGAGGACA CCATCAACCT GTTGGCAGGC
AGCGCCCATG CCAAAGGGCT TGAGTTCGTG GTGGATGTGG ATGCCAACGT ACCGGAAAAC
CTGAGCGGCG ATGTGATGCG CCTCGGGCAG GTGATGACCA ACCTTTTGGG CAACGCCATC
AAATTTACCG AAGAAGGCAG TGTCCATCTC AAAATCAGTC TTGCCAGTCT GGAAGACAAC
AACCTGACCC TGCGCTGTGA GGTGACTGAC ACAGGCATAG GCATTGATCC CGAGCAGCAG
GAACTCTTGT TCCAGGCCTT TGGTCAGGCC GACTCCTCCA TTTCCCGCCG CTACGGCGGC
ACAGGCCTCG GGCTGGTTAT CACCAAGCGT TTGGTAGTGC AGATGATGGG CGGTCGCATA
GGCTTTCATT CAGAGGTCGG CAAAGGCTCC AGCTTCTGGT TCACCGTGCC GCTGCAACTC
AGTCCCTTCC CGGTGCACGA TACCCTGCCG CTGGAAAAAC TGATTGGCCA CTCGGTGCTC
TTGTTTGAGC CCCGCAAACT CACCCGCGAG TCCATCGCCC GTAAGCTCAA GGACTGGCAC
ATGATGGTGA CGCTGGCGAG CAACGAAGAT GAGCTGGAGC GGCATTTGGA TGACAGGCAC
TACGACGCCA TCCTGTTATC CGGCCAAAGC TGCGAATCAT GCGAAGATCT ACAGCGGCAC
CTGTCACGGG TAAAAGACCA TACAGGCTCG CTGCTGCTGC TCAACGACTG TCTCGACCCA
GAGGTGTACA CCCAGGAGAT GGAGCCCTTT GTGGATCTGG TGCTGCAGCT GCCGGTGAGT
GAGCTGAAGC TGGCGCAAAA CCTCATATTC CCACCGGTGA AGAAAAATGC CGCGCCCAAA
CCGGCGCTGG CCACAAAACC CAGCGCCCGC CACCCCCTCA ATGTGCTGGC GGTGGACGAT
AACCTGGCCA ACCTCAAGCT TATCGACACC CTGCTCAAAG AGCTTGTTGC CAACGTGGTG
GCGGTCAGCA GCGGCGATCA GGCGGTGGCG CTGGCCAAGA GCCGTTCGTT CGACCTCATC
TTTATGGATA TTCAGATGCC GGGCACCGAC GGGGTTACCG CAACCCGCCT GATACGGCAG
GACTCACTCA ACCGCAATAC CCCAATTATT GCCGTTACCG CCCATGCCAT TAACGAAGAA
CGTGAGCGTA TACAGGCAAG CGGCATGGAC GGTTATCTGC CCAAGCCCAT TGATGAAGCC
GCCCTTAAAG GGGTGATTTC GCGCTGGCTC ACCCGGCCCA AGTTCACCCA CTTCGACAGC
AACACGCTCA ACTGGGAACT GTGCCTGAGC CAGGCTAATC AGAAAGAGGA TCTGGCCATC
GACATGTTAA AGATGATGCT GGAGTCCTTG CCCGGTACGG TTAACGATAT CGAGCTTGCC
ATGGCCCGCA GCGATAACGA GTCTATGCTG TATACGGTGC ACAAACTCCA CGGGGCCAGC
TGCTATTGCG GCGTGCCCAC CACCCAAAAA CTCTGCCAGC AAATCGAGTC TGCGCTGAAA
GGCGGTGCCG ATGTGGCGGA TGTTGAACCG GAAATCCTTG AGTTACTTGA TGAGCTGACT
AAGGTAGAAT CGGCGGCAAC CCAAGTGATT TCCCAGATGT CAGCGGAAGT ACCCAATGAG
TTCTAA
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| Protein sequence | MNTAHNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YDLEDTLKDM GSNIIEPLAI
SAEQSLSTNN REITKILLAR AQLNKSTLVK SIAIFDINNQ LFVTSHYHKD FEVMRYKEAL
ESLKETQFEH EGDTLIVRTP IFAISSKQPM GDNIDEGSGR FSEAVVMPDN SNAALLGYVS
MMLNKEKALL EQHRAAVAAF IIVLIGVQLN LLFTFRLVKN VTQPITDMVK LVGKIREGKL
DARLEGNLIG ELDLLNRGIN AMAASLSEYH DEMQQNIDQA TSDLRETLEQ IEIQNIALDR
AKKDAQEASR IKSEFLANMS HELRTPLNGV IGFARQLLKT PLHSSQMEYI KTIERSATSL
LQIINDILDF SKLEANKMVL ETMPFGLRAS LEDTINLLAG SAHAKGLEFV VDVDANVPEN
LSGDVMRLGQ VMTNLLGNAI KFTEEGSVHL KISLASLEDN NLTLRCEVTD TGIGIDPEQQ
ELLFQAFGQA DSSISRRYGG TGLGLVITKR LVVQMMGGRI GFHSEVGKGS SFWFTVPLQL
SPFPVHDTLP LEKLIGHSVL LFEPRKLTRE SIARKLKDWH MMVTLASNED ELERHLDDRH
YDAILLSGQS CESCEDLQRH LSRVKDHTGS LLLLNDCLDP EVYTQEMEPF VDLVLQLPVS
ELKLAQNLIF PPVKKNAAPK PALATKPSAR HPLNVLAVDD NLANLKLIDT LLKELVANVV
AVSSGDQAVA LAKSRSFDLI FMDIQMPGTD GVTATRLIRQ DSLNRNTPII AVTAHAINEE
RERIQASGMD GYLPKPIDEA ALKGVISRWL TRPKFTHFDS NTLNWELCLS QANQKEDLAI
DMLKMMLESL PGTVNDIELA MARSDNESML YTVHKLHGAS CYCGVPTTQK LCQQIESALK
GGADVADVEP EILELLDELT KVESAATQVI SQMSAEVPNE F
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