| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1023 |
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| Symbol | |
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| ID | 4603275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1236632 |
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| End bp | 1238221 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780362 |
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| Product | membrane-bound serine protease (ClpP class)-like protein |
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| Protein accession | YP_926900 |
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| Protein GI | 119774160 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATA GGTTGTTCAA TAGATTGTTC AGCCCCGAGG TTGTCAGGTT ACTGGCCTCG
ATTAACCGGC TTTTCGCTTC TAAACCGGGG CTGTTTGCAT TACTGCTCCC CCTGCTGCTC
GGCAGTTTGA ATTCTGGCGT GGTGGCGAGC CCTCACGCTG CTTTTTCCTC CGGATTTATC
TTAAGCAACG CCAACATCGC AAATACCACG CCTGTATCTG ACCGCGACAT TGGCTCAAAC
CATTCCGCCG ACTTAGCCGC TGCAGTTACG TCACACCAAA ACACGGGTGC CCGGGGCCTC
GAAGGGACTG TGGCTCCCAT ATGGCTGCTG GAGGTAAAAG GCGCTATAGG GCCTGGGGTA
GCTGACTATC TTGTTCGTAC CCTGAACAAG GCACAAAAGC AGGTCGTACC GCCCCAACTA
CTCTTGCTCA CCCTGGATAC CCCCGGAGGT CTGGTGGCAA GCCTGAGGGA CATCAATCAA
GCCATACTCA CTTCAGAAAT ACCGGTAGCC TGCCTGGTGT ATCCGGCCGG TGCCCGCGCC
GCCAGTGCCG GCACCTATAT GCTTTACGCT TGCCATCTGG CAGCGATGGC GCCGGCCACC
AGTTTAGGGG CCGCGACGCC GGTACAACTC GGGCCACCTG CGGGAGGCGA GCCGAAGGAT
AAGGAAGCCG AGCAGCAAGG GGCTTCGGAT ATGGAGCGTA AAATCCTCAA TGATGCCGTT
GCCTATATCA GGACCCTCGC ACAGTTAAGA GGGCGAAACG CTGAATGGGG CGAACAGGCG
GTGCGCGAGG CTGCCACTGC GACTGCTTCT GAGGCGCTGG CGCTGGGGGC GATAGATTTA
ATTGCCAAAG ATCCTTACGC CTTGCTTGAG GCCATTGATG GTCGACAGTT TGTGATTAAT
GACACAGTCC GCGTCCTGCA TACCCACAAG GCATTGCTCC TTGACGCCAA ACCAGACTGG
CGAACGACTT TTCTGAGTAC CATCACCAAT CCAAATGTGG CTTATGTGCT GATGATGCTG
GGTATCTATG GACTGCTGCT GGAATTTTAC AGTCCGGGCA TGGGGATCTC CGGTGTGGTG
GGCGCCATCT GTTTGCTGGT GGCCATGTTT GCCCTGCAAA TGCTGCCAAT CAATTACGCT
GGCGCGGCGC TGCTGATATT GGGGATAGGG TTGCTGGTGG CCGAATCTTT GGTTCCCAGT
TTCGGCATTC TGGGGTTTGG TGGTGTAGTC GCTTTCGTGC TCGGTTCAGT CTTTCTCATC
GACAGTGAGT TGGATGCCTT TCGTATTGCC TGGCCTGTCA TTCTGGCACT GGCCATGGTG
AGTCTGCTGT TCTTTGCCGT GCTGGTTTCC CTGTTATTTA AGCAGCGCCA CAGGGCTGTG
GTCAGTGGGC CTGAAGCAAT GGTAGGTGCC AGGGCTCTGG TGCTGGATGG TTTTCCCGGT
AAAGGGCAGG TGCTTTTTAT GGGAGAGCGT TGGCAGGGCC ACAGTGAGCA GGCGCTGCAG
AGCGGAACCT GGGTCAGGGT AGAGTCTATC TCCGGGCTCT TGCTGGAGCT TGGTCCGCTG
GATGAATCAA AGGAGAAACA AGATGAATGA
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| Protein sequence | MFNRLFNRLF SPEVVRLLAS INRLFASKPG LFALLLPLLL GSLNSGVVAS PHAAFSSGFI
LSNANIANTT PVSDRDIGSN HSADLAAAVT SHQNTGARGL EGTVAPIWLL EVKGAIGPGV
ADYLVRTLNK AQKQVVPPQL LLLTLDTPGG LVASLRDINQ AILTSEIPVA CLVYPAGARA
ASAGTYMLYA CHLAAMAPAT SLGAATPVQL GPPAGGEPKD KEAEQQGASD MERKILNDAV
AYIRTLAQLR GRNAEWGEQA VREAATATAS EALALGAIDL IAKDPYALLE AIDGRQFVIN
DTVRVLHTHK ALLLDAKPDW RTTFLSTITN PNVAYVLMML GIYGLLLEFY SPGMGISGVV
GAICLLVAMF ALQMLPINYA GAALLILGIG LLVAESLVPS FGILGFGGVV AFVLGSVFLI
DSELDAFRIA WPVILALAMV SLLFFAVLVS LLFKQRHRAV VSGPEAMVGA RALVLDGFPG
KGQVLFMGER WQGHSEQALQ SGTWVRVESI SGLLLELGPL DESKEKQDE
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