| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1017 |
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| Symbol | |
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| ID | 4603269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1232017 |
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| End bp | 1232670 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780356 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_926894 |
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| Protein GI | 119774154 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.743536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACCG GGATCATTGA AGCCGTTGGC CAGTTAAGAC GAATCGATCG TAAGGGCGAT
GATATTCGCC TGACGGTCGC CAGTGGCAAG CTGGATTTAT CCGATGTTCG CCTTGGCGAC
AGTATCGCCA CCAATGGCGT GTGTCTGACC GTGGTGGAAT GCCTTGCCGA TGGTTATGTT
GCCGATGTAT CAGCTGAAAC CGTGAAGCTC ACCGGTTTTG GCGACTATCG TCCCGGCCAG
GCGGTGAATC TGGAAAAGGC TGTCACCCCA ACCACCCGCC TTGGCGGACA CCTGGTGAGC
GGCCACGTGG ATGGCCGAGC CATGGTGGTC AGTCGCAGTC ACCTGGGTAA AGCCATTGAG
TTTTGGCTTG AAGCACCCGC CGAGCTTGCC CGTTATATTG CCCACAAGGG CTCCATTACC
ATTGACGGGG TGAGTCTGAC TGTAAATGAA GTGGACGGCA GCCGTTTTCG CCTGACCATA
GTGCCCCACA CCGCAGGGGA AACCACCCTG ATTGATTTGG CGGTGGGCGA TAAGGTGAAC
CTCGAAGTGG ATCAGATTGC CCGTTATCTT GAGCGATTGA TGCAACGCGG GGAAGAAAGT
GTCTCCGGCG GTGTGACCCT GGATTTGCTT GCCCGCAGCG GATTTATGCG CTGA
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| Protein sequence | MFTGIIEAVG QLRRIDRKGD DIRLTVASGK LDLSDVRLGD SIATNGVCLT VVECLADGYV
ADVSAETVKL TGFGDYRPGQ AVNLEKAVTP TTRLGGHLVS GHVDGRAMVV SRSHLGKAIE
FWLEAPAELA RYIAHKGSIT IDGVSLTVNE VDGSRFRLTI VPHTAGETTL IDLAVGDKVN
LEVDQIARYL ERLMQRGEES VSGGVTLDLL ARSGFMR
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