| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1015 |
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| Symbol | nrdR |
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| ID | 4603267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1230372 |
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| End bp | 1230821 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780354 |
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| Product | transcriptional regulator NrdR |
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| Protein accession | YP_926892 |
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| Protein GI | 119774152 |
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| COG category | [K] Transcription |
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| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
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| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTGTC CATTTTGCAA CGCAACCGAC ACCAAGGTGA TCGACTCCCG TCTGGTGGGA
GAAGGGCATC AGGTAAGGCG TCGGCGGGAG TGCACTGAAT GCCACGAGCG CTTTACTACC
TTTGAAGGTG CCGAACTGGT GATGCCGAGG GTCATCAAGC GTGATGGCAC CCGTCAGCCA
TTCGATGAAG AAAAGCTGCG CAGCGGTATG CTCAAAGCCG TGGAAAAACG CCCCGTGTCC
ATCGATCAGA TTGACCAGGC GATGAACAAG ATTAAGTCAA CTTTGCGTGC CACCGGCGAG
CGCGAAGTGC CCTCAGAGAT GGTTGGCAAC CTGATGATGG ACAGCCTGAT TGAGCTGGAT
AAGGTCGCTT ATATCCGCTT TGCCTCCGTA TACCGCGCCT TTGAAGATGT TTCTGAGTTT
GGAGAGGCCA TTGCCAGGCT TCAGAAGTAA
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| Protein sequence | MHCPFCNATD TKVIDSRLVG EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGTRQP
FDEEKLRSGM LKAVEKRPVS IDQIDQAMNK IKSTLRATGE REVPSEMVGN LMMDSLIELD
KVAYIRFASV YRAFEDVSEF GEAIARLQK
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