| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1013 |
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| Symbol | |
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| ID | 4603265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1227104 |
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| End bp | 1228771 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780352 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_926890 |
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| Protein GI | 119774150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGT TTGTTTACAG CATGCTGCGG GTTGGCAAAA TCGTGCCGCC CAAGAAGCAA
ATCCTTAAAG ACATCTCCTT AAGCTTCTTC CCCGGCGCCA AGATTGGTGT TCTGGGTCTG
AACGGTTCAG GTAAATCCAC GTTGCTGCGC ATCATGGCCG GTATCGACAC CGAAATCGAA
GGTGAAGCCC GCCCCATGCC CGGCCTCAAG ATTGGCTACC TGCCACAGGA GCCACAGCTT
GATCCGAATC AGACAGTGCG TGAAGCCATC GAAGAAGCCG TTGGCGACGC CAAGCGCGCC
CTGACCCGTT TGGATGAAGT GTACGCCGCC TATGCCGAGC CGGACGCCGA CTTCGACGCC
CTGGCCAAGG AGCAAGGTGA GCTTGAAGCC ATTATTCAGG CCCAGGATGC CCATAACCTG
GACAACATCC TCGAGCGCGC CGCCGACGCC CTGCGTCTGC CGGACTGGGA TGCCAGGATT
GAAGTGCTGT CAGGTGGTGA ACGCCGACGG GTGGCCCTGT GTCGTCTGCT GCTGGAAAAA
CCGGAGATGT TGCTGCTGGA CGAACCCACC AACCACCTGG ACGCCGAGTC TGTAGCCTGG
CTTGAGCACT TCCTGCAGGA ATACTCAGGT ACGGTAGTGG CCATTACCCA CGACCGTTAC
TTCCTCGACA ATGCCGCCGG CTGGATTCTG GAACTGGACC GCGGCGAAGG TATCCCATGG
CAGGGCAACT ACTCCAGCTG GCTTGAGCAA AAAGACGCCC GTCTGAAGCA GGAAGCCGCC
ACCGAGAGCG CCCGTCAAAA GACCATCTCC AAGGAACTCG AGTGGGTGCG TCAGGGTGCC
AAGGGCCGTC AGTCCAAGGG CAAGGCCCGT ATGAACCGCT TTGAAGAGCT GAACAACTCC
GATTACCAGC GCCGCAACGA GACCAACGAG CTGTTTATTC CGCCCGGACC ACGTCTCGGT
GACAAGGTGA TTGAGGTGCG TAACCTCACC AAGAGCTATG GCGATCGTGT GCTTATCGAT
AATCTGTCGT TCTCGGTGCC CAAAGGTGCC ATCGTGGGCA TTATCGGTGC CAACGGTGCC
GGCAAATCCA CTCTGTTCCG TATGCTGAGC GGCGCCGAAC AGCCTGACAG CGGCGAGATT
GAGATCGGTG AAACCGTGAA AATCGCCTCG GTTGAGCAGT TCCGTGACTC CATGAACAAC
AAGGCCACCA TCTGGGAAGA AATTTCCGGC GGTCAGGACA TCATGCGCAT CAACAACATG
GAAATCCCAA GCCGCGCCTA CGTGGGCCGC TTTAACTTCC GTGGTGCGGA TCAGCAAAAG
ATCATCGGCA CCCTGTCCGG TGGTGAGCGT AACCGCGTGC ACCTGGCCAA GCTGCTGCAG
GCCGGCGGCA ACGTACTACT GCTCGACGAA CCCACCAACG ATCTGGACGT GGAAACCCTG
CGTGCCCTCG AAGAAGCCCT GCTGGAATTC CCCGGCTGCG CCATGGTGAT TTCCCACGAC
CGTTGGTTCC TCGACCGTAT CTGTACCCAC ATCCTCGATT ACCGTGATGA GGGCCAGGTG
AACTTCTACG AAGGTAACTA CACCGAGTAC TCTACCTGGC TGAAGAACAC CTACGGCACC
GATGTGGTTG AGCCGCACCG CCTCAAGTAC AAGCGCATGA CCAAGTAA
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| Protein sequence | MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGIDTEIE
GEARPMPGLK IGYLPQEPQL DPNQTVREAI EEAVGDAKRA LTRLDEVYAA YAEPDADFDA
LAKEQGELEA IIQAQDAHNL DNILERAADA LRLPDWDARI EVLSGGERRR VALCRLLLEK
PEMLLLDEPT NHLDAESVAW LEHFLQEYSG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
QGNYSSWLEQ KDARLKQEAA TESARQKTIS KELEWVRQGA KGRQSKGKAR MNRFEELNNS
DYQRRNETNE LFIPPGPRLG DKVIEVRNLT KSYGDRVLID NLSFSVPKGA IVGIIGANGA
GKSTLFRMLS GAEQPDSGEI EIGETVKIAS VEQFRDSMNN KATIWEEISG GQDIMRINNM
EIPSRAYVGR FNFRGADQQK IIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEALLEF PGCAMVISHD RWFLDRICTH ILDYRDEGQV NFYEGNYTEY STWLKNTYGT
DVVEPHRLKY KRMTK
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