| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0998 |
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| Symbol | |
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| ID | 4603250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1210171 |
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| End bp | 1211172 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780337 |
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| Product | U32 family peptidase |
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| Protein accession | YP_926875 |
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| Protein GI | 119774135 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTGT TGTGTCCGGC CGGCAATCTG GCCGCGCTCA AGGTCGCCCT CAATGCCGGG
GCCGATGCGA TTTACCTGGG GCTGAAAGAT GATACCAATG CCCGTTCTTT TGCCGGGCTG
AACTTTACCC CTGAGCAAAT GACCGAGGCC AGACGCCTCA CCGCTGCGGC GGGGAAAAAG
CTCTACCTCA CCCTGAATAC CTTTCCCAAA CCCGGCGAAG AGCAGCGTTG GTATCAGGCG
GTGGATTTGG CGGCACGGTT AAAAGCCGAT GCGCTGATCG TGGCCGATAT TTCGTTGCTG
GATTATGCCC ACAGCCGCTA TCCCAATCTG CCGCTGCATC TGTCGGTGCA GGCCAGCGCC
ACCAATCTGG GGGCCCTCAC CCTCTACAAG GAGGCTTTCA ATATAGAACG GGTGGTTTTG
CCACGGGTGC TGTCGATGAA GCAGGTGCGG GATCTGGCCG CCGACACCCC GGTGGATTTG
GAAGTCTTTG CCTTTGGTAG CCTGTGCATC ATGGCCGAAG GTCGCTGCCA CCTGTCGTCT
TATGTCACGG GCCAGTCGCC CAACACGGGT GGGTCCTGCT CACCCGCCAA ACATGTGCGC
TGGCAGCAGC AGGGAGACCA GAGCCTGACC CGCCTCAACG AAGTCTTAAT TGATAAGGCC
TCCCAGCATG AACAGATGGG CTATCCGGTG GTATGTAAGG GGCGTTTTAT CGCCGAAGAC
AGCGATACCC CAGACTACCT GCTCGAGTCC CCCACCAGCC TCAATACCCT GAGTTTGCTG
CCAGAGCTGG CACGGGCTGG CGTGGTGTCG CTCAAGATTG AAGGACGCCA GCGCAGTCCT
GCCTATGTGG AGCAGGTTAC CCGAGTGTGG CGCGCCGCCA TCGATACCTT TAAGCGCAAC
CCAGAGCAAT ATCAGGTTCA GGCCGACTGG GACAGGGCGC TGGGTAAATT ATCCGAAGGC
CAAATCACCA CGCTGGGCGC CTATGAGCGT CGCTGGCAGT AA
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| Protein sequence | MELLCPAGNL AALKVALNAG ADAIYLGLKD DTNARSFAGL NFTPEQMTEA RRLTAAAGKK
LYLTLNTFPK PGEEQRWYQA VDLAARLKAD ALIVADISLL DYAHSRYPNL PLHLSVQASA
TNLGALTLYK EAFNIERVVL PRVLSMKQVR DLAADTPVDL EVFAFGSLCI MAEGRCHLSS
YVTGQSPNTG GSCSPAKHVR WQQQGDQSLT RLNEVLIDKA SQHEQMGYPV VCKGRFIAED
SDTPDYLLES PTSLNTLSLL PELARAGVVS LKIEGRQRSP AYVEQVTRVW RAAIDTFKRN
PEQYQVQADW DRALGKLSEG QITTLGAYER RWQ
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