Gene Sama_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0994 
Symbol 
ID4603246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1205023 
End bp1206381 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content54% 
IMG OID639780333 
Producthypothetical protein 
Protein accessionYP_926871 
Protein GI119774131 
COG category[S] Function unknown 
COG ID[COG3314] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTCAG AAAAACAAAA TCACAACATC AAGACGATAC TGACCTTTAT CGTCCCCTCC 
CTGATAGGGC TTCTGCTGTT TATGACGCCG GTCAGCTATC AGGATGCCAT CACCATTCCC
ATCGCGATTA TTTCAAAAGC CCTGCAACAT GCGCTGAGTG ATAAGGCGAC AGCCATAGTG
ACGGCAGTCG TGGTTCTGAC GACCCTGGTG TCTCTCATCA CCAAGGTGGC AAAGCCCAAA
TTTATTACCG AAAACGGTTT TTTGAATGCG CTGTTTAACG TCAGCCCCAT GTGGTTTTTC
ATCCGTATGT TGGGTGCGGC CTTCATCCTG ATGACCTTTG CCGGAGTGGG TCCAGAAGCC
ATTACGTCAG GCAACACCGG TGGTCTGGTG CTGAACGACC TGTTGCCCGT GCTGCTCAGC
GTGTTTATTT TTGCCGGTAT GCTGCTGCCA CTGCTGCTGA ATTTTGGCCT GCTGGAGCTT
TTTGGTGCTC TGCTGACCAA AATCATGCGA CCTGTGTTTA ACCTGCCCGG CCGCTGTGCC
ATCGACTGTA TGGCCTCCTG GCTCGGTGAT GGCAGTGTGG GGATCCTACT CACCAGCAAA
CAGTACGAAG GCCGTTTTTA CACTGCCCGC GAAGCGGCGG TCATTGGCAC GACCTTCTCG
GCGGTATCCA TTACCTTCTC GCTGGTGGTG ATCTCTCAGG TGAAGCTTGA GGCACTGTTT
GTACCCTTCT ACCTGACGGT GTGTCTGGCC GGTATCGTGG CTGCCATTGT GGTGCCCAAG
TTGCCACCGC TTTGCTGGAA AAAAGACAAC TACATCGACG GCACCCCGAG ACATCCTGAC
GATGAAGTGG TCCCCGCCGG TCACAGTGTG TTTTCCTGGG GCTATGACAT GGCACTCGCC
AAGGCAGCGG CCAGCGGCGG CGTCAAGGAG ACCTTTACCG AAGGCGTGAA AAACGTCGCC
GATATGGTGC TGGGAATTTT GCCGGTGGTA ATGGCCATAG GTACTGTGGC GCTGATGATT
GCCGAATACA CACCGATTTT TGACTACCTC GGCATGCCCT TTATTCCGCT GCTTGAACTG
CTGCAAATCC CGGAAGCCAC CGCTGCCTCC AAAACTATCG TTGTGGGCTT TGCAGACATG
TTTATCCCAT CGATTCTGGC AGCCAGCATC GAATCGGATA TGACCCGCTT TGTGATTGCG
GCCCTGTCCG TGACCCAGCT GATTTACATG AGCGAAGTCG GCGCCCTGCT GATTGGTTCG
CGCATTCCGG TCAACCTGCC GGAGCTGTTC GTGATTTTCG TTCTGCGTAC TCTGGTCACC
CTGCCGGTCA TCGCCGGTGT GGCTCACCTG ATATTCTGA
 
Protein sequence
MASEKQNHNI KTILTFIVPS LIGLLLFMTP VSYQDAITIP IAIISKALQH ALSDKATAIV 
TAVVVLTTLV SLITKVAKPK FITENGFLNA LFNVSPMWFF IRMLGAAFIL MTFAGVGPEA
ITSGNTGGLV LNDLLPVLLS VFIFAGMLLP LLLNFGLLEL FGALLTKIMR PVFNLPGRCA
IDCMASWLGD GSVGILLTSK QYEGRFYTAR EAAVIGTTFS AVSITFSLVV ISQVKLEALF
VPFYLTVCLA GIVAAIVVPK LPPLCWKKDN YIDGTPRHPD DEVVPAGHSV FSWGYDMALA
KAAASGGVKE TFTEGVKNVA DMVLGILPVV MAIGTVALMI AEYTPIFDYL GMPFIPLLEL
LQIPEATAAS KTIVVGFADM FIPSILAASI ESDMTRFVIA ALSVTQLIYM SEVGALLIGS
RIPVNLPELF VIFVLRTLVT LPVIAGVAHL IF