Gene Sama_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0992 
Symbol 
ID4603244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1200226 
End bp1201074 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content58% 
IMG OID639780331 
Producthypothetical protein 
Protein accessionYP_926869 
Protein GI119774129 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA ATAAAGCCGC TTGTGCCACA CAGCGCCGCG GAGCACTGGG ACACTTTCGC 
TGCCTGTGGA TTTCGGATGT ACACCTTGGT ACACCCGACT GCCAGGCAGG TCCCCTCCTC
AGCCTGCTTT CATCCTACCA TTACGACAAA CTGATCCTCG CCGGCGATAT TGTCGATCTC
TGGTCGCTCA AGCGCCGCAG TTTCTGGCCC CAAAGCCACA GACAATTGCT GGAATTGCTG
CTGTCTCTGG CAGAGCAAGG CACCGACATC GTTTACGTGC CAGGCAATCA CGACGAATGG
TTTCGCCGCT TTCACGGCAT CAGCTTTCGC GGCATTCACA TCGAGCGCAC TCACAGACAT
CACAGCCGCA CCGGACTGGA CGTACTGACC ATTCACGGCG ACGACTTCGA TGCCGAAATT
GCCATAGGCC GTTTCCACGC CCGTCTCGGC GACAACCTTT ATGACCTGCT GCTGTGGCTA
AACCGGGCAC TGCACCGCTG CCGGAAGTTG TTGGGCTACC CCTACTGGTC CCTGGCCGGT
TACATCAAAG CCAGAGTCAG CAAGGCGCAG GCCGCCATCA GCAAGTACCG TGAAGTCGCA
CTGAAACACT GCGCACGCCA GGAGGCAGAC ATGCTGGTCT GTGGCCATAT CCACCAGCCT
GCGCTCATCG AACAGGGCTC ACTGATTTAT GCCAACACAG GTGACTGGGT AGAAAACACT
ACCCTGATTG CCGAAACACC CCAGGGAAAC TTCCAGCTGC TCAGGTGGAA CCATGCCGAG
CACCGGCTGG AGCTGGAGCA GGAAGTGCTC CTCAACAACA CAAGCAAGGC CCGCATGAAG
GTTGCCTGA
 
Protein sequence
MDTNKAACAT QRRGALGHFR CLWISDVHLG TPDCQAGPLL SLLSSYHYDK LILAGDIVDL 
WSLKRRSFWP QSHRQLLELL LSLAEQGTDI VYVPGNHDEW FRRFHGISFR GIHIERTHRH
HSRTGLDVLT IHGDDFDAEI AIGRFHARLG DNLYDLLLWL NRALHRCRKL LGYPYWSLAG
YIKARVSKAQ AAISKYREVA LKHCARQEAD MLVCGHIHQP ALIEQGSLIY ANTGDWVENT
TLIAETPQGN FQLLRWNHAE HRLELEQEVL LNNTSKARMK VA