| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0986 |
|---|
| Symbol | torD |
|---|
| ID | 4603238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1193315 |
|---|
| End bp | 1194022 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639780325 |
|---|
| Product | chaperone protein TorD |
|---|
| Protein accession | YP_926863 |
|---|
| Protein GI | 119774123 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA TGTCTCATTC CGAAGAGTTC GCCGCAGGCG AAATGAATGC CATCCGCGCC
TCAGTGTGGC AACTGCTAAG CTCGCTCTAC GCCAAAGAGC TGAGCCGTGA GCGCATCTGT
GAGCTTGCTG GCGCCGAGCT GTGGCAGGCA TTTGCAGCAC AAGTCGAGCT TCAGGCGTCG
GCTTCGCAAA TCCAGGCGGC GCTCGCTCAC GCAGCTAAGT ATGACGCAAG TCAGGGCGGC
GATGACGCCC GCCTCGAACT TGCCGCCGAC TTTTGCAGCG CCTTTTTGCA AAATGCCGAG
CACTGCGCCG CGCCTTACGC GAGCCTGTAT CTGGGTGATG CTGGCAAAAC TGAGCGGAAT
GAGACAGCGA GTTATGATAC GGAGAGTCAG GATAAGGCCG CCCGAAGCCT CTACGGTGAA
AAACATCAGC TGATGAGTGA TTACCTGCGC TCGGCGGGCC TTGGCCTTGA TGCGGATTTT
CGCGAGCCAA GCGATCATCT GGCGGTGATC CTTGGGCTGA TGGCGCACCT GTGCACCTCA
GCAACTGAGG AGAGCCAGCG GGCGTTCCTT GAAAGCGCCA TCTTAAGCTG GCTGCCCGAG
TTCAACGCAA GACTTGGCAA GCTCAAGCTT GAAAGTCCGC TCTATGGCGC CCTTGGCGAC
TTTACCCTCG CCTGGGCCCG ACTCGATACT GAGCTTTTGG GTGGTTAA
|
|---|
| Protein sequence | MNKMSHSEEF AAGEMNAIRA SVWQLLSSLY AKELSRERIC ELAGAELWQA FAAQVELQAS
ASQIQAALAH AAKYDASQGG DDARLELAAD FCSAFLQNAE HCAAPYASLY LGDAGKTERN
ETASYDTESQ DKAARSLYGE KHQLMSDYLR SAGLGLDADF REPSDHLAVI LGLMAHLCTS
ATEESQRAFL ESAILSWLPE FNARLGKLKL ESPLYGALGD FTLAWARLDT ELLGG
|
|---|
| |