| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0984 |
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| Symbol | |
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| ID | 4603236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1189216 |
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| End bp | 1190253 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780323 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_926861 |
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| Protein GI | 119774121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.290134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACATAA GCCCCAGAAT CCTTTTACTC TTGATAGCGC TGGGATTTTT TACCGCCGAG
GCCGCCCCAT GGCAACTTGA GCAGCGCACG CCGTTCAACG CCATAGAGCA ACAAAGCAAG
GCGCTCATGC TGACGCCCCT TGAGCGTGCA CATAAGCCCT GGAAGCTGTG TGTACTGGTA
CCCCACTTAA AGGATGCCTA TTGGATTGGC ATTAACTATG GCCTCGCGGC TCAAGCAAAG
AAGCTCGGCG TCAGTTTTGA GATGTTCGAG GCTGGCGGCT ACCCCAATCA CGACCGCCAA
CAGACCCAGT TGGCCCATTG TTTAGGCGGC GATTTTGATG CTGTGCTGCT GGGCGCCGTA
ACCCCGCATT TGCTCAAAGA CGTGCCCGGC GGGCTTAATA AGCCTGTACT GGCGCTGGTG
AACAAGCTGG AGGATCCCCG GGTTGGCACT CATATCGGGG TGAACTGGTA TCAAATGGGC
AGCCTTATCG GCAATGCCAT CAAACGCCAG TTCACATCAG AGGCCAGTCT GGCGCTGCTG
GCCGGGCCCG AGTCTGTGGG TGGCACTGAC CTTGTTGAGC AGGGCATAGG GCAGAGCCTC
AGCGGCAGCA AGCTCAGTAT TGGTGCCATT CGCCACGCCG ACAACAACCG CCATTTGCAG
CGGGAACAGC TGCAACAGCT GCTGGAATCG AGCCGTCCTG ACGCCATTGT GGGCAGCGCT
GTGGCCATTG AAGTGGCGGT CAATCAGTTC GGCCAAACCC CGCCATCCTA TCCCATAGTA
CTGGGGGCGA GTTACTTCTC CCCGGCTATC GCCCGCGCAC TGCAGCGAGG CAAAATCGCT
GCAGCCTGTG ACGACAAGGT GGTATTGCAG GGCATGGTGG CAGTGGAATT GGCGGTAAGG
CAATTGCAGG GCGAAACTGC CTTTGGTGAT ATAGGACCGG CGATTGTAGT CAGAACGGCC
AACAACAGCG ATGCCGCAGC GCTGATTGAA TCCTTACCCC CTGCCGAGTT TTATCCTGTT
TATCGCTTTA ATCCCTGA
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| Protein sequence | MNISPRILLL LIALGFFTAE AAPWQLEQRT PFNAIEQQSK ALMLTPLERA HKPWKLCVLV
PHLKDAYWIG INYGLAAQAK KLGVSFEMFE AGGYPNHDRQ QTQLAHCLGG DFDAVLLGAV
TPHLLKDVPG GLNKPVLALV NKLEDPRVGT HIGVNWYQMG SLIGNAIKRQ FTSEASLALL
AGPESVGGTD LVEQGIGQSL SGSKLSIGAI RHADNNRHLQ REQLQQLLES SRPDAIVGSA
VAIEVAVNQF GQTPPSYPIV LGASYFSPAI ARALQRGKIA AACDDKVVLQ GMVAVELAVR
QLQGETAFGD IGPAIVVRTA NNSDAAALIE SLPPAEFYPV YRFNP
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