| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0981 |
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| Symbol | |
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| ID | 4603233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1186543 |
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| End bp | 1187907 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780320 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_926858 |
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| Protein GI | 119774118 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.188403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA ATAAAACCGC GTACGTATGC AATGAGTGTG GTCAGGACTT TCCCCGCTGG
CAAGGGCAGT GCAGCGCTTG CCTGGAGTGG AACTCCATCA CCGAAGTGAG ACTGGGCGCC
GCCACTGTGG CACGCAGCGG ACGTTTCAGC GGATATGCTG GTGCCGGGGT ATCTGAGGTC
AAAACTCTCG ACCAAATTGA TTTGAATGAG CTGCCCCGAA TCCCAAGCTC CTTTACCGAG
TTTGACCGGG TTCTGGGCGG AGGCATAGTG CCCGGCAGCG CCATCCTGAT TGGTGGTCAT
CCGGGAGCGG GTAAAAGTAC GCTGTTATTG CAGACCCTGT GTCAGTTAGC GGAGGTCATG
CCGGCTCTCT ATGTGACCGG CGAAGAGTCG CTGCAGCAGG TGGCCATGCG GGCTCATCGA
CTGGGGCTGC CTACTTCCAA ATTAAAGATG CTCTCTGAAA CCAGTGTCGA AACCCTCTGT
GACATTGCCC TGAAAGAACA GCCCAAGCTG ATAGTGGTGG ACTCCATTCA GGTGATGCAC
ATGAGTGATG TGCAGTCCTC CCCCGGCAGT GTGGCACAGG TGCGTGAATC AGCGTCATTC
CTTACCCGGT TTGCCAAGCA AAACGGTATC GCCGTGATCA TGGTCGGTCA CGTCACCAAA
GACGGCAGTC TCGCTGGCCC CAAGGTGCTT GAGCACTGTA TCGACTGCTC TGTGATGTTT
GAAGGCGACT CCGACAGCCG TTATCGCACC CTCCGTTCCC ATAAAAACCG TTTTGGTGCC
ATCAATGAGC TTGGCGTCTT TGCCATGACT GAGCGGGGCC TCAAAGAGGT GGCCAACCCG
TCGGCAATTT TCCTCTCCCG TGGAGAAGAG GCTTCCAGTG GCTCCCTGGT GATGGTGGTC
TGGGAAGGTA CCCGGCCGCT GCTGGTGGAG CTGCAGGTGC TGGTGGATAA CTCGGCGCTG
TCCAATCCGC GGCGGGTGGC GGTGGGGATG GATGCCAACC GTCTGGCCAT GTTACTGGCG
GTGATGCATC GCCATGGCGG CCTGCAAATG TCGGATCAGG ACGTGTTTGT GAACGTAGTG
GGTGGGGTAA AGGTCACCGA AACCAGCGCC GACCTGACCT TATTGCTGGC CATGGTGTCC
AGTTTCCGTG GCGAAGTCTT GCCAAGGGAT CTGGTGGCCT TTGGTGAGGT GGGACTTTCG
GGCGAAATTC GCCCCGTGCC CAACGGTCAG GAGCGATTGG TGGAAGCGGC CAAGCACGGC
TTTAAACGGG CGATTGTGCC AAGAGCCAAT ATGCCGAAAA AGCCACCCGA AGGCATGGAA
GTGATTGGCG TATCAAAGCT AGCTGAAGCC TTGGCAGCCC TTTAA
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| Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACLEW NSITEVRLGA ATVARSGRFS GYAGAGVSEV
KTLDQIDLNE LPRIPSSFTE FDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCQLAEVM
PALYVTGEES LQQVAMRAHR LGLPTSKLKM LSETSVETLC DIALKEQPKL IVVDSIQVMH
MSDVQSSPGS VAQVRESASF LTRFAKQNGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF
EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ASSGSLVMVV
WEGTRPLLVE LQVLVDNSAL SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV
GGVKVTETSA DLTLLLAMVS SFRGEVLPRD LVAFGEVGLS GEIRPVPNGQ ERLVEAAKHG
FKRAIVPRAN MPKKPPEGME VIGVSKLAEA LAAL
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