| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0958 |
|---|
| Symbol | secG |
|---|
| ID | 4603210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 1158352 |
|---|
| End bp | 1158678 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639780295 |
|---|
| Product | preprotein translocase subunit SecG |
|---|
| Protein accession | YP_926835 |
|---|
| Protein GI | 119774095 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1314] Preprotein translocase subunit SecG |
|---|
| TIGRFAM ID | [TIGR00810] protein translocase, SecG subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.117439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.139091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAG TACTGATAGT TATCTACTTG TTGGTTGCAC TTGGCCTGAT TGGTCTGGTT
CTCATCCAGC AAGGTAAAGG GGCTGACATG GGTGCGTCAT TTGGCGCAGG CGCTTCAGGC
ACCCTGTTTG GTTCCAGTGG TTCAGGCAAC TTTTTGACCC GTTCCACTGC AATCCTGGCT
GTGGCCTTCT TCACTCTAAG CCTGATCATT GGCAACCTGA GTGCGAACCA CATCAAGCAG
GAAGATAAAT GGAACAACAT CGGTTCTGAA CCTACTGCAG AGGAAGTTCA GCAAACCGAA
AAGTCAGAAA CCAAAATTCC TGACTAA
|
|---|
| Protein sequence | MYEVLIVIYL LVALGLIGLV LIQQGKGADM GASFGAGASG TLFGSSGSGN FLTRSTAILA
VAFFTLSLII GNLSANHIKQ EDKWNNIGSE PTAEEVQQTE KSETKIPD
|
|---|
| |