| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0957 |
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| Symbol | |
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| ID | 4603209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1157568 |
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| End bp | 1158350 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780294 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_926834 |
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| Protein GI | 119774094 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0345759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.153456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCA GACGTCCAAT GGTAGCAGGC AACTGGAAGA TGAATGGCAG CGCAGCGCTG
GCACAGGAAC TCTTCAAAAA GTTTGCCGTT AAGCTCCAAA ACGATTCAGC GGAAGTTGTC
CTGTGTCCGC CGACAATTTA CCTCGAGAGC GTCAGGCAGT TGCTCGAAGC GAATAAAGAA
GCCCTAAATG GTTGTCTTGT TCGAATGGGG GCTCAGAATT TGAGTCAACA TGACTTCGGT
GCTTACACCG GGGAGATTTC CGGGCAGATG CTGAAAGATT CCGGATGCCG ATATGTGATT
GTCGGGCATT CAGAGCGGCG AAGAATGTAT GGTGAAACCA GTGATATAGT TGCTGAGAAG
TTCGCCGCCG CCCAAAAGCA CGGCTTGACT CCAATACTTT GTGTTGGTGA GTCAGGCCCA
GCTCGAGAAG CCAGAAGAAC CTTTGAGGTG ATAGCTGAAG AGCTGGACGT GGTAATCGAA
AAGAACGGTA CCATGGCTTT TGATAACGCC ATTATCGCCT ATGAGCCCCT GTGGGCAGTA
GGGACAGGTA AAAGCGCTAC ACCAGAGCAA GCCCAGGAAG TTCACGCGTT TATTCGCAGG
AGGCTCTCTG AAGTTTCTCC CTTCATTGGG GAGAATGTCA GGATTCTGTA TGGCGGAAGT
GTAACGCCAA GCAATGCGGC GGATTTATTC GCCCAACCTG ATGTTGACGG TGGACTGATT
GGCGGAGCCA GTTTAAACTC GACCGAGTTT TTAACTCTGT GTTCCATAGC AATGAGCGCA
TAA
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| Protein sequence | MALRRPMVAG NWKMNGSAAL AQELFKKFAV KLQNDSAEVV LCPPTIYLES VRQLLEANKE
ALNGCLVRMG AQNLSQHDFG AYTGEISGQM LKDSGCRYVI VGHSERRRMY GETSDIVAEK
FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDVVIE KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRR RLSEVSPFIG ENVRILYGGS VTPSNAADLF AQPDVDGGLI
GGASLNSTEF LTLCSIAMSA
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