Gene Sama_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0949 
Symbol 
ID4605935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1150227 
End bp1150772 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content53% 
IMG OID639780286 
Productcytochrome b561 
Protein accessionYP_926826 
Protein GI119774086 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000303039 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.493253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAA ATCGCGCGTC AGGTTATGGC TGGATTGCTA TTGGAATTCA CTGGATGATG 
GCCGTCCTGA TCCTGGGGCT CTTCGCTTTG GGGTTGTGGA TGGTGGAACT TAACTATTAC
AGCCAGTGGT ACCAAGTCGC CCCATACTGG CACAAGGGCT TGGGAGGCGT TGTATTTGCC
TTATTGTTAC TGAGGCTGGG GATTCGGTTG GGGGACCAAC AGCCCAGCGC CTTGGGGAAA
GGCGCCGAAG TGGTGCTTGC CAAAATAGTG CATCTCGCGC TGTACCTGTT GCCACTGGGA
TTGGTGATAA GTGGCTACCT AATTTCGACA GCCGATGGCC GTGCCCTGGA GCTGCTGGGG
CTGGTATCCA TTCCATCGCT TGTGTCATTT CCGGGTCAGG AAGATACGGC TGGACAAATC
CACGGTGTGC TTGCGTGGCT ATTAATCGCC CTGGTGAGTG CCCATGCGCT GGCTGCCATC
AAACACCACC TTATTAACAG AAACGCCACT TTATTAAGAA TGCTAAGGCC CCAAAAGGAA
ATCTGA
 
Protein sequence
MWRNRASGYG WIAIGIHWMM AVLILGLFAL GLWMVELNYY SQWYQVAPYW HKGLGGVVFA 
LLLLRLGIRL GDQQPSALGK GAEVVLAKIV HLALYLLPLG LVISGYLIST ADGRALELLG
LVSIPSLVSF PGQEDTAGQI HGVLAWLLIA LVSAHALAAI KHHLINRNAT LLRMLRPQKE
I