Gene Sama_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0945 
Symbol 
ID4603197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1144569 
End bp1145567 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content58% 
IMG OID639780280 
Productglutamine--fructose-6-phosphate transaminase (isomerizing) 
Protein accessionYP_926822 
Protein GI119774082 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0895718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA CCATCATGGA GCAGGAAGCC CGCACGGCTC CCGCCAAAAT CGCGGCCCAG 
CTGGCTGCCA ACGCTCAGAT CACAGCCGAA CTCGGCGCCA AGCTCAGAGA GCTTAATCCC
CGCTTTGTGA TGATTGTGGG TCGTGGCAGC TCCGATCACG CCGGTGTATT CGGAAAGTAC
CTGTTTGAAA TCGAAACCGG TGTGCCTACG TTCGCCGCCG CACCTTCTGT TGCCAGCGTT
TACGGTAAAT CGCTGAAACT CGAAGGCGCG CTGGTGATTG TGATCTCCCA GTCCGGTCGT
AGCCCTGATA TTCTTGCCCA GGCCCGTATG GCCAAAAACG CCGGTGCCTT CTGTGTGGCG
CTGGTGAACG ACGAATCAGC GCCCATCAAA GACATAGTAG ATGTTGTGCT GCCACTGCGC
GCCGGTGAAG AAAAGGCCGT AGCCGCTACC AAGAGCTACC TGTGCACCCT GTCTGCGCTG
ATCCAACTGG CAGCTGCCTG GACCCAGAGT GAGTCGTTGG CCAAGGCAGT TGACACCATG
CCAACCGCGC TGGAAGCCGC AGTAAACGCT GAGCCTCAGC TTACTGCAGA AGGTATTGGC
GCCGTGCGTA ACCTGGTGGT GCTGGGCCGT GGCCTTGGTT ATGCCGTCTC CAAAGAGATT
GCCCTCAAGC TTAAAGAAGT GTGCTCTATC CACGCAGAAG CCTTCTCCAG CGCCGAGTTC
CTCCACGGTC CTGTGACCCT GGTTGAGAAG AAGCTGACCA TTGTGGATGT TTGCGTGGGC
GATGAGTCTT ATGCCAGCCA TATCGAACAG ATTGAGAACG TCAGCAGCCG CGGTGCCGAT
TTGGTTCACC TGAACCAAAC CTCCACCGAC ATTCACCCAC GGGTGGCACC ACTTGCGCTG
CTGCAACGCT TCTACATTGA TGTGGCCGCC GTAGCCGTTG CCCGTGGCAT CGACCCGGAT
GCACCGGCGG GCCTGAAAAA GGTTACCCAG ACCCTGTAA
 
Protein sequence
MTNTIMEQEA RTAPAKIAAQ LAANAQITAE LGAKLRELNP RFVMIVGRGS SDHAGVFGKY 
LFEIETGVPT FAAAPSVASV YGKSLKLEGA LVIVISQSGR SPDILAQARM AKNAGAFCVA
LVNDESAPIK DIVDVVLPLR AGEEKAVAAT KSYLCTLSAL IQLAAAWTQS ESLAKAVDTM
PTALEAAVNA EPQLTAEGIG AVRNLVVLGR GLGYAVSKEI ALKLKEVCSI HAEAFSSAEF
LHGPVTLVEK KLTIVDVCVG DESYASHIEQ IENVSSRGAD LVHLNQTSTD IHPRVAPLAL
LQRFYIDVAA VAVARGIDPD APAGLKKVTQ TL