| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0940 |
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| Symbol | |
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| ID | 4603192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1136632 |
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| End bp | 1137324 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639780275 |
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| Product | hypothetical protein |
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| Protein accession | YP_926817 |
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| Protein GI | 119774077 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00274123 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCGC AGTACGTTCC TCTCAATAAT ACCGCTCACA AAAACCTGAA AGTTAAGCAA
GCCCTTGAAC TTGCTGAATT TGAAAAGCAT CACATGCTGC CCTTGGTTGT TCAGGAATTT
ATGCCCGCAG CCACCAGTTT CCCCATCATT TTTGCCAAAA ACACCGACAG CGGTGAGTAT
CAGCCAGTGG CTGTGACCTC TCTGAAGCCA GAGAGCAACA AATTTATCAA AGATGGTAAA
TGGACCCAGC GCTATGTGCC TATGCAGCTG CGCGTGGCGC CTTTTATCGC TGGCCCTGAT
GAAACTCAGG AAAAGCTGCT GATTGGTATT AATCAAAGCA GTACCCTGCT GAGCGAAGAA
GAAGGCATCG CGCTGTTTAA TGAAAACGGC GAACAAACTG AATTCCTGCA AGACCGCGTG
AAATTTATCG GCCAGCTGTT CGACTTCCGT GAGTTGACCA AGCAGTTTGT AAAAACCCTG
ACTGATCATG ACTTGCTGCA GCCAAAAACC CTGACAGTGA ATGGCAAAGA CGGCGAGAAA
GCCAACTACG ACGGCATCTA CATGGTTGAT GAGAAGAAGC TGCACGAGCT GAGCGATGAA
GCCAAGCTTG AGCTGTTCAA CAAGGGCGCC CTGTCAGCCA TTTATGCTCA CCTGGCATCA
CTGAATCAAA TCGACCTGGT GATGGGCGAA TAA
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| Protein sequence | MTAQYVPLNN TAHKNLKVKQ ALELAEFEKH HMLPLVVQEF MPAATSFPII FAKNTDSGEY
QPVAVTSLKP ESNKFIKDGK WTQRYVPMQL RVAPFIAGPD ETQEKLLIGI NQSSTLLSEE
EGIALFNENG EQTEFLQDRV KFIGQLFDFR ELTKQFVKTL TDHDLLQPKT LTVNGKDGEK
ANYDGIYMVD EKKLHELSDE AKLELFNKGA LSAIYAHLAS LNQIDLVMGE
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