| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0937 |
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| Symbol | |
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| ID | 4603189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1130902 |
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| End bp | 1131915 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780272 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_926814 |
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| Protein GI | 119774074 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.266523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA CAATTAATGA CGTTGCCAAA TACGCCGGCG TTTCTATCAA GACGGTTTCC
CGGGTTACCA ACAACGAACC CTCGGTGAAA CAGGCAACCA TAGACAAGGT AAATGAAGCC
ATCAAGGCGC TTAATTACCA GCCCAACCTG GCTGCGCGTA ACCTCGCCGG CACCAAGTCT
TATGTTATCG GCTTTATCTA CGACAATCCC AATGCCTACT ATATTATCGA TATGCAAAAC
GGCATTTTAT CGGCATGTCG CGATAAGGGT TATGAACTCC TGATCCACCC TTGCGATGCT
ACCGCCGACA GTATTTGCGA AGAGTTAACT GCCTTGGTAA AGCACGCCAG ACTGGCCGGA
TTGGTCCTGA CTCCTCCCCT GTCGGAAGAT CCCAAAATTT TAGCGGCACT CGACAGCATT
GAGGCCCATT ACGTGCGCAT CATTGCCGGA GACAAAACCA AAGAAAGTTG TGGTTTGACG
GTATTGGTTA ATGACAGGCA CGGCGCGGTG TCTATTACCC AACATCTGAT TGATTTGGGG
CACAAACATA TCGCTTTTAT CAGCGGGGAC GAGCAGCACG AATCGACCAA AGAGCGCTTC
GCCGGTTTTT GCGACGCTCT CTCACTCAAC AACATTACCT TGAACCCGGC GTTTGTAATT
GAAGGGCAGT ATTCGTTTGA ATCAGGTGTT GAAGGGGCTA AACAGCTGCT TTCAATGACA
CCAAGGCCAA CGGCCATCGT CGCGTGTAAC GATGAAATAG CGGCTGGTGC CTTGTTTGCC
GCGCGTTTGC AGGGGGTTGA TATCCCTCGC GATATCTCAA TTGTCGGCTT CGAAGACAGC
CCGTTTTCAC GCCAAACCTG GCCCAAACTG ACTACGGTTC ATCAACCGAA TCAAAAAATA
GCACAGGTCG CTACCGAGCT GCTGATTGCT AATCGTAAAG AGCAGCGCCT GGACAGTGCC
AAGGTGTTCA CCCCCGAGCC TGTTGTCCGC GATTCCAGCA GCAACCCAGG TTAA
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| Protein sequence | MKVTINDVAK YAGVSIKTVS RVTNNEPSVK QATIDKVNEA IKALNYQPNL AARNLAGTKS
YVIGFIYDNP NAYYIIDMQN GILSACRDKG YELLIHPCDA TADSICEELT ALVKHARLAG
LVLTPPLSED PKILAALDSI EAHYVRIIAG DKTKESCGLT VLVNDRHGAV SITQHLIDLG
HKHIAFISGD EQHESTKERF AGFCDALSLN NITLNPAFVI EGQYSFESGV EGAKQLLSMT
PRPTAIVACN DEIAAGALFA ARLQGVDIPR DISIVGFEDS PFSRQTWPKL TTVHQPNQKI
AQVATELLIA NRKEQRLDSA KVFTPEPVVR DSSSNPG
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