| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0925 |
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| Symbol | lspA |
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| ID | 4603177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1119245 |
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| End bp | 1119751 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780260 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_926802 |
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| Protein GI | 119774062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGA ACTGGAAAGA AAGTGGCCTG CGCTGGTATT GGGTAGTAGT GGTGGTGTTT
CTGGCCGACC AGCTGTCCAA GCAGTGGGTA CTGGCCAACT TTGACCTGTA CGAGTCGGTC
AAGCTGCTGC CGTTTTTTAA CTTCACCTAT GTGCGCAACT ATGGCGCTGC CTTCAGCTTC
CTGCATGATG CAGGGGGCTG GCAGCGCTGG CTGTTTACGG CGGTGGCTGT GGGCTTCAGC
GTGCTGTTAA CCATTTGGCT GCGTAAGCAG CCAGCCAACA TGGTGCGGCT GAATCTGGCC
TACACCTTGG TGATTGGCGG TGCGCTTGGT AATCTGATTG ACCGTCTGCA ACATGGCTTT
GTGGTGGATT TCCTCGATTT TTATTGGAAC ACCGCCCATT ACCCGGCGTT TAACATAGCA
GATGCCGCCA TCTTTATTGG TGCCGTGCTG ATTATTATCG ACAGCTTTAA AGCGTCCAGC
TCGGATGACA AGGCCATCAA GGAGTAA
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| Protein sequence | MQLNWKESGL RWYWVVVVVF LADQLSKQWV LANFDLYESV KLLPFFNFTY VRNYGAAFSF
LHDAGGWQRW LFTAVAVGFS VLLTIWLRKQ PANMVRLNLA YTLVIGGALG NLIDRLQHGF
VVDFLDFYWN TAHYPAFNIA DAAIFIGAVL IIIDSFKASS SDDKAIKE
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