| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0916 |
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| Symbol | |
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| ID | 4603168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1108397 |
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| End bp | 1109839 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780251 |
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| Product | sodium:alanine symporter family protein |
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| Protein accession | YP_926793 |
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| Protein GI | 119774053 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000210867 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAA CTATTGTTAA TTTTCTTAAT GCCCTGCTAT GGGGCAAGCT GCTGGTTTAC
GGACTGGTGG GTGCGGGGCT TTACTTTACC GTTCGCCTGG CCTTTATCCA ACTGACTCAC
TTTAAACATG GTATCAAGGT TATGACCATC AGCCGTCAGG GTGGTGATGG TGGCTTATCT
TCTTTCCAGG TGTTCTGTAC CAGCATGGCA GCACGTGTTG GTGCTGGTAA TATGGCCGGT
GTTGCTGTAG CCATTGGCAC TGCAGGACCA GGAGCTGTGT TCTGGATGTG GGCGATTGCA
GTACTCGGTA TGGCAACTGC CATGATTGAA TCGACCCTCG CACAGGTCTA CAAGGTGAAA
GATGAAGATG GCCAGTTCCG CGGTGGTCCT GCCTATTATA TGGAGAAGGG CTTGGGTCAG
CGCTGGATGG GAGCACTGTT CTCTGTCTTC CTGATTTTGG CATTTGGTTT GGTATTCAAC
GCAGTTCAGG CCAATACCAT CACCGGTGCG CTGGAAAGGG TATTCGGATT CGAACCCATC
TATGTTGGCA TTGGAATAGT GGTAGCCAGT GGGTTCGTCA TTATGGGCGG CCTTCGTAAA
GTGGCGCGTG TATCAGAAAT CGTTGTGCCC TTTATGGCTC TGGTCTACCT GTTGATTGCC
TCTGTGGTTG TCGTGGTGAA CCTAGATAAA CTGCCAGAAG TATTCAGCCT GATAATTAAG
AGTGCATTTG GTTGGCAAGA AGCCGTAGCC GGCGGTGTTG CATACAGTGT GGCTCAGGCC
ATGCAAGCAG GTATTGCCCG TGGCCTCTTC TCCAACGAAG CAGGGATGGG CAGTGCCGCG
AACGTAGCTG CCAGCGCCAC ACCCAACCCA AATCATCCAG CTTCTCAGGG ATTTGTGCAG
ATGATGGGAG TGTTTGTCGA TACGCTGGTG ATTTGTACCG CCACTGCGGC CATTATTTTG
CTGGCCGGTG ACATGGGTGC AGAAAGTGAT GGTATTAAAC TCACCATCGA CGCCTTGACC
AGCCATGTAG GAGATTGGGG CGGCGCATTC ATCGCCTTTG CGATTTTCCT GTTCTGCTTT
ACATCTATTA TCGCTAACTA TTCCTACGCT GAAACCAATG TCATGTTCCT GTCAGGTAAC
CGCAAAACTG CGTTGCCGCT GTTCAGGTTA CTGGTGCTGG GCATGGTGAT GTTTGGTGCT
ATGGCAAAAA TCAGTCTGGT TTGGGATCTC GCGGATGTTT CCATGGGCCT GATGGCAATA
GTGAATATTA TCGCGCTGGT ACTACTTTCA GGTCTCGCTA TTCGGGTGAT CGATGACTAT
CGGGAGCAGC TTAAAAAAGG TGACATGCCG GTATTTGACC GAAGTAAGTT TCCAGAGCTG
GATGGACAGG TCGAAACTGA CATCTGGCCC GAGAATGCCA AAGCTAGGGC CAACGAAGCC
TGA
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| Protein sequence | MLETIVNFLN ALLWGKLLVY GLVGAGLYFT VRLAFIQLTH FKHGIKVMTI SRQGGDGGLS
SFQVFCTSMA ARVGAGNMAG VAVAIGTAGP GAVFWMWAIA VLGMATAMIE STLAQVYKVK
DEDGQFRGGP AYYMEKGLGQ RWMGALFSVF LILAFGLVFN AVQANTITGA LERVFGFEPI
YVGIGIVVAS GFVIMGGLRK VARVSEIVVP FMALVYLLIA SVVVVVNLDK LPEVFSLIIK
SAFGWQEAVA GGVAYSVAQA MQAGIARGLF SNEAGMGSAA NVAASATPNP NHPASQGFVQ
MMGVFVDTLV ICTATAAIIL LAGDMGAESD GIKLTIDALT SHVGDWGGAF IAFAIFLFCF
TSIIANYSYA ETNVMFLSGN RKTALPLFRL LVLGMVMFGA MAKISLVWDL ADVSMGLMAI
VNIIALVLLS GLAIRVIDDY REQLKKGDMP VFDRSKFPEL DGQVETDIWP ENAKARANEA
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