| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0915 |
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| Symbol | |
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| ID | 4603167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1105589 |
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| End bp | 1107955 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780250 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_926792 |
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| Protein GI | 119774052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0207514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAC AGCACGAGAT TACCGCACTG AAGAAATTTG TGCGGGCCAC TAACTTTCTA
GCCACCTCAC AGATTTATCT CAAGCAGAAT GTGTTACACA AGCGACCACT GGTTCACGGA
GATATCAAAC CCAGACTGCT CGGTCACTGG GGTACCTGTC CCGGCATCAA TTTTGTTTAT
GCCAACGTCA ACCGTCTCAT CGTAAAACAC AAGCGCCCCT TCCTCTATTT AGTTGGCCCA
GGCCATGGCT TCCCTGCTGT TCAGGCAAAC CTGTTTATTG AAGGCTCACT GAGTCACTTC
TACCCCGAAA CCATTCCGTA CAATGAAACC GGCATCGAAG ATATCTGTAA GAAATTTTCA
GCCGCCTACG GTTATCCTTC ACATGCCAAC CCAGAAGCGC CAGGACAAAT TCTGGAGGGT
GGTGAGCTGG GTTATTCCTT GTCTGTAGGT TTTGGTGCCG TGCTGGACAA CCCCGATCTG
ATTGCCACCG TGCTCGTTGG GGACGGTGAG TCCGAGACCG GCCCCCTGGC CGCGTCCTGG
TACGCCAACC GCCTGGTCAA CCCAGCCACT TGCGGCGCTG TACTGCCAAT CGTGCACATT
AACGGGTACA AGATCTCAGG CCCAACCCGC ATGGGTCGTA TGAGCCACGA AGAACTGGAT
CTTGAATTCC GCGGTCTGGG TTATCACCCC ATCATTGTGG ACGATCAGCT GGAAGAAGAT
GTCTATGAGC AAATGGTCAA GGCCATGGAT CTCTCCTATG AGATGATTAA TGACATCCAA
ACCCGTGCCC GAAATGGTGA AGACGTTTGT AAGCCACGCT GGCCGGTGAT CCTGATGCGC
ACCGCCAAAG GTTGGACTGG TGTAGCCGAA GACAAGGGTA AGAAACTTGA AGGTAACTGT
GAATCGCACC AGGTTATCGT CAATAAGTGC GCCACAGATA AAGGCCACCT CGAAGCCTTG
GATAACTGGC TGGCAAGCTA TGGATTTGCA GAGCTTTGCA GCGTGACAGA ACAGGGCGAA
CTCCAGTTTG ACCCCGATAT CAAGTCACTT ATCCCGCCCA AAGAACTCTG CTGTGGTCGT
CAACGCCTGT CCTATGGTGG CGAAGTAGTC CGTGCACTGA CCAACCCCGA TCTGACCAAG
TTGGCTTACG GCGCAGAAGT ACCACGTGGT CATCGTGGCT ACTCCATGAA TAAAATGGGC
GAGTGGATGC GTGAAGCCTT CAAACTGAAC CGCGATCAGC GCAATCTGCG CATCTTCAGT
CCGGATGAAA CATACTCCAA CCAGCTGCAA GCCGTATTTG AAGAAACCGA TCGCGCGTGG
CAGTGGCCTA TCGAAAGTTG GGACCAGGAC ATGAGCCGCG ACGGCCGCGT GTTGGAGCTG
CTGTCTGAAA ACCTGCTGTT TGGTATGATG CACGGATACA CGGTAACGGG TCGTCACGGT
ATGTTCCCAA CCTATGAGGC CTTCTCGCAG GTGGTCTCTT CAATGGCGGA CCAATACTGT
AAATACGTTT ACGCAAGCCA GGGCGTCCAT TTCCGTAAGC CACTGCCATC CTGCAACGTC
GTACTTTCTT CTCTGCTTGA GCGTCAGGAT CACAACGGTT ATTCGCACCA GAACCCCAGC
TTCCTCGGTG CCATGCTGGA AAAACACCCA GAGATCATTT CTGCCTATCT GCCAGCCGAT
GCCAACAGCA CTCTGGTTTA TACCGAGCGT GCGTATGCTG ACCGCGACAA ATTGAACATC
ATTGTTGCAG GTAAGAAAGA GCTGCCTCAA TGGTTGACCC TGGATGAAGC CCGTCGCCAA
GCCAAAGATG GTCTGATGAT TTGGGACTTT GCCTCTGATG ACAACCCGGA TGTGGTACTG
GCGGGCTGTG GTGACTACGC CACCCAGGAG TGTATGGCTT CATTGGTACT GATTCGCGAA
TTGCTGCCAC GGGTACGTTT ACGCTTCGTA AGTGTGTCTG AACTCAACTC CAATGGCCTT
GGCAGTCGTA AGTTCCAGCA AAAGCCCTGG ATGATGGACG AAATCTTTAC CAAAGATAAA
GGCGTGGTGT TCAACTACCA CGGTTATCCA AACACCATCA AGAAACTGGT ATTCGATTAC
AAAGGTAGCC ACAGATTCCG CATTAAGGGC TATGAAGAGG AAGGTTCCAC AACCACACCA
TTCGATATGG GCGTGCGAAA TGGCACTTCA CGCTATCACC TGGTAATCGA TATGGCCTAT
AAATTGTTCC AGCAAGGGAT TATCGATGAA ACCCAACATG TGGCCATCAC CACAGATATG
CTGCAACGTT TGGTTGACCA TAAGAATTAT ATTAAGGCCA ATGGCGTAGA TCCGATTCAC
ATCGAAAATT GGGTGTGGAC CCGTTAA
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| Protein sequence | MTQQHEITAL KKFVRATNFL ATSQIYLKQN VLHKRPLVHG DIKPRLLGHW GTCPGINFVY
ANVNRLIVKH KRPFLYLVGP GHGFPAVQAN LFIEGSLSHF YPETIPYNET GIEDICKKFS
AAYGYPSHAN PEAPGQILEG GELGYSLSVG FGAVLDNPDL IATVLVGDGE SETGPLAASW
YANRLVNPAT CGAVLPIVHI NGYKISGPTR MGRMSHEELD LEFRGLGYHP IIVDDQLEED
VYEQMVKAMD LSYEMINDIQ TRARNGEDVC KPRWPVILMR TAKGWTGVAE DKGKKLEGNC
ESHQVIVNKC ATDKGHLEAL DNWLASYGFA ELCSVTEQGE LQFDPDIKSL IPPKELCCGR
QRLSYGGEVV RALTNPDLTK LAYGAEVPRG HRGYSMNKMG EWMREAFKLN RDQRNLRIFS
PDETYSNQLQ AVFEETDRAW QWPIESWDQD MSRDGRVLEL LSENLLFGMM HGYTVTGRHG
MFPTYEAFSQ VVSSMADQYC KYVYASQGVH FRKPLPSCNV VLSSLLERQD HNGYSHQNPS
FLGAMLEKHP EIISAYLPAD ANSTLVYTER AYADRDKLNI IVAGKKELPQ WLTLDEARRQ
AKDGLMIWDF ASDDNPDVVL AGCGDYATQE CMASLVLIRE LLPRVRLRFV SVSELNSNGL
GSRKFQQKPW MMDEIFTKDK GVVFNYHGYP NTIKKLVFDY KGSHRFRIKG YEEEGSTTTP
FDMGVRNGTS RYHLVIDMAY KLFQQGIIDE TQHVAITTDM LQRLVDHKNY IKANGVDPIH
IENWVWTR
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