Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0913 |
Symbol | |
ID | 4603165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1103101 |
End bp | 1104054 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639780248 |
Product | transaldolase B |
Protein accession | YP_926790 |
Protein GI | 119774050 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.507004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATA CCTTAGAGCA ACTCAAATCC TTTACCACCA TAGTCGCTGA TACCGGCGAT ATCGAAGCCA TCAAACGCTC TCAGCCTGAA GATGCCACCA CCAACCCTTC ATTGATCCTG AAAGCAGCGC AAATCCCTGA ATATTCAGGC CTTATCGATA ATGCCATTGC CTGGGCCAAA ACCCAGAGTG ACAATCTTGA AACCCAAATT GAAGACGCTG CCGATAAACT GGCTGTCAAC ATAGGTCTGG AAATCCTGAA ACTGGTTCCC GGCCGCATCT CCACTGAAGT CGATGCCCGT CTGTCTTTCG ATAAAACAGC TTCTATCGCC AAGGCCCATA AGCTTATCCG TCTGTATCAG GAAGCCGGTA TCGATAAGAG CCGCATCCTG ATCAAACTGG CTTCCACATG GGAAGGTATC TGTGCCGCTA AAGAGCTTGA GGCCGAAGGC ATCAACTGTA ACCTCACGCT GCTGTTCAGC TTTGCCCAGG CTCGCGCCTG CGCCGAAGCC GGTGTATTTC TGATTTCACC TTTCGTTGGC CGCATTCTCG ACTGGTACAA GAAGTCTACC GGCAAAGATT ACCGCGCCAG TGAAGACCCG GGCGTTGTAT CAGTAACTGA TATCTACAAC TACTATAAGC GCCACGGTTA CAAGACTGTG GTGATGGGCG CAAGCTTCCG TAACACTGGT GAAATCATTG AGCTGGCTGG TTGTGACCGC CTGACCATTG GCCCGTCATT GCTCGAAGAA ATGGCCGCCA GCAACACCCC TGTGGTACGT AAATTGACAC CGACGACCGA CACTGTTGCA CCGGGTCCTG TAATGAGCGA AGCCGAATTC CGCTGGGAGA TGAACCAGGA TGCCATGGCA GTTGAAAAGC TGGCCGAAGG GATCCGTAAC TTCGCCATCG ATCAAGGCAA ACTGGAAGAG ATGCTCAAGG CTAAACTGGC CTGA
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Protein sequence | MANTLEQLKS FTTIVADTGD IEAIKRSQPE DATTNPSLIL KAAQIPEYSG LIDNAIAWAK TQSDNLETQI EDAADKLAVN IGLEILKLVP GRISTEVDAR LSFDKTASIA KAHKLIRLYQ EAGIDKSRIL IKLASTWEGI CAAKELEAEG INCNLTLLFS FAQARACAEA GVFLISPFVG RILDWYKKST GKDYRASEDP GVVSVTDIYN YYKRHGYKTV VMGASFRNTG EIIELAGCDR LTIGPSLLEE MAASNTPVVR KLTPTTDTVA PGPVMSEAEF RWEMNQDAMA VEKLAEGIRN FAIDQGKLEE MLKAKLA
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