Gene Sama_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0910 
Symbol 
ID4603162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1100464 
End bp1101003 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content44% 
IMG OID639780245 
Producthypothetical protein 
Protein accessionYP_926787 
Protein GI119774047 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.162836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACC GATTGATGAG GGATCACAAG CATATTGCGA TATTGCTGAA GATCCTCAAT 
AAAAAACGCA TCCTACTGGA AAGCGGTGAG AGCGTTAATT TTAATCTGGT TCGCGACATT
GTGGAGTATA TGCAAAGCTA TGCCGAGCAC AGTCATCATC CTCTGGAGGA TGTCATTTAC
GATTACTGTC TCGATAAATA CCCTGATTTG CCGCGCCTGG CCAGATTGAA TGAAGAGCAT
CAGCAGCTGG TGGCGTCGTC AGCCTCTTTA ATGTCGACCT TGAACCTTAT TCTTAATGAC
GTGGTGGTTG CGAAAGAGAA GCTGATTGGC GATCTATCCG GTTATGTCAG TGCACAGGAA
GCACATATGC TGTTTGAGGA GCGAGAGCTT TTTCCCATTC TGGCAAACGA TCTTAAGGAT
GAAGATTGGC ATGAAATCAA TGAACGTTGT TTGAACAAAT TGATGGATGA CCCTCTATTC
AGCGATGATG ATAACCAACT GTTTGATGAG CTACGAAATT ACCTGTCACT GTCAGATTGA
 
Protein sequence
MLNRLMRDHK HIAILLKILN KKRILLESGE SVNFNLVRDI VEYMQSYAEH SHHPLEDVIY 
DYCLDKYPDL PRLARLNEEH QQLVASSASL MSTLNLILND VVVAKEKLIG DLSGYVSAQE
AHMLFEEREL FPILANDLKD EDWHEINERC LNKLMDDPLF SDDDNQLFDE LRNYLSLSD