| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0904 |
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| Symbol | |
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| ID | 4603156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1091171 |
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| End bp | 1091782 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780239 |
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| Product | peptidyl-prolyl cis-trans isomerase SlyD |
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| Protein accession | YP_926781 |
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| Protein GI | 119774041 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.211342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.715022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CCAAGAACAG TGCGGTAACC ATCCACTATC GCCTGAGCGA CAGCCAGGGC
CAGCTGATTG AAAGTTCCTT CGAGGCCGAT CCCATGGTGT ACCTGCACGG TGCAGAGAAC
CTGATACCGG GTCTTGAAAA TGCCCTGGAA GGTAAACTGG CCGGTGATAC CCTCGAAGTC
ACAGTAGACT GTGAACAAGC CTATGGCCCT TACCACGATG GCCTGCGTCA GGAAGTGCCA
CTGGAAGCCT TTGGCGATAT TCAGGACATA GTGCCCGGTA TGCGCTTCAT TGCAGAAACT
GAAATGGGCC AGCGCCCTGT GCAAGTTACT GAAGTGCTTG AAAATACCGT TGTAGTTGAC
GGTAACCACC CACTTGCTGG CCAGTCACTG ACCTTCTTTG TTGAAGTAAA AGATGTACGT
TTGGCGACCG ATGAAGAAGT TGCCCATGGT CATATCCATG CCCACGGTGG CTGTGGTGGT
CATCATCACC ATCATGACGA AGGTGGATGC TGTGGCGGCC ATGATCATGA CCATGGTCAC
TGCGAGCATG ACTCAGAGAA AGAAGCCAAA CCCGGCTGTG ATGGTAACGG CGGCTGTGGC
TGTCGCGGCT AA
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| Protein sequence | MKITKNSAVT IHYRLSDSQG QLIESSFEAD PMVYLHGAEN LIPGLENALE GKLAGDTLEV
TVDCEQAYGP YHDGLRQEVP LEAFGDIQDI VPGMRFIAET EMGQRPVQVT EVLENTVVVD
GNHPLAGQSL TFFVEVKDVR LATDEEVAHG HIHAHGGCGG HHHHHDEGGC CGGHDHDHGH
CEHDSEKEAK PGCDGNGGCG CRG
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