| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0898 |
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| Symbol | |
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| ID | 4603150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1086123 |
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| End bp | 1088102 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780233 |
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| Product | prephenate dehydratase / chorismate mutase / phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_926775 |
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| Protein GI | 119774035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase
[COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01797] chorismate mutase domain of proteobacterial P-protein, clade 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.983271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAC CACAGCCCCT GAGTGAAACC CGGGAGCAGA TCACCGACAT CGACAACACA
GTGCTGCAAT TGCTGGCACG GCGTCGGGAG CTCAGCCTCG AAGTCGCTCG CAGTAAAGAA
GTGGATGTGC GCCCCGTGCG CGATACTCAG CGCGAGCGCG AGCTGTTGTC GAGACTGGTA
CAAAAAGGCC GCGAGCAGGG GCTGGATCCG CACTTTGTTA TGCAGCTATA TCAAAGCATT
ATCGAAGACT CAGTACTCAA CCAGCAGGCC TATCTCCATG GCCGGGCCAA CCCGGAAACC
CAAAAACAAC AGTATTGCAT TGCTTATCTG GGTGCCAGAG GCTCCTACTC ATACCTCGCC
GCCAATCGAT ACTGTCAACG CCGCCAGGTA GACATGGTGG ATCTGGGCTG TCAAAGCTTC
GATGAAATAG TTCATGCAGT GGAATCCGGA CATGCCGATT ACGGTTTCCT ACCAATTGAA
AACACTTCCT CTGGCTCCAT TAACGAAGTC TATGATGTGC TTCAGCACAC CAGCCTGGCC
ATTGTGGGTG AAACCACCAT CGAGGTGGGT CATTGCCTGC TTGCGAAGCC CGGTACCAAG
GCATCGGATA TCAAGACCCT GTATGCCCAT CCGCAGCCAA TCAGCCAATG CAGCCGCTAT
CTGGCACGCC ACCCCGGTCT TAGACTCGAA TACTGCGCCT CCAGCGCCGA AGCCATGGAA
AAGGTGCAGG CTGCTGACAG CAAGGATGTC GCCGCCATCG GCAGCGCCGA AGGGGGGGGC
CTGTACCAGC TGGAAGCAAT CGAAAAGGGA CTCGCCAATC AAAAGGTCAA CCAAAGCCGC
TTTATTGTAG TAGCCCGTAA AGCCGTGGCA GTGCCCGAAC AGTTGCCCGC CAAATGCACC
CTCATTATGG CAACAGGCCA AAAGCCAGGA GCCCTAGTAG AAGCCTTGCT GGTGCTCAAG
GCCAACAACC TTAATATGAG CAAGCTCGAG AGCCGCCCGA TCCCAGGTAC GCCCTGGGAG
GAAATGTTTT ATCTCGATAT CGACGCCAAC CTGGCCAGTG TCCCTATGCA ACTGGCGCTG
AAAGAGCTTG AACGCATTAC CCGTTTTATT AAGGTGCTGG GTTGCTACCC CTGTGAAACA
GTAGCACCCA CGCAGCTATC CAACGCCCAG CTGTTAATCG AGCCCGAGCA TTTCCGTACC
GATGCGCCAG AGCCAGCCGC CGCACAGGCC CGGGATGGCG ATTCGGTACC TGCCCGCCAT
AGTCTGGGGT ACAAAGAAAC CGTCAGCGAA GTACAAGCGG GCGCCTTGCT CATCGGCAAT
GGTCATTCGG GTGCACTCGC GATGCTTTCG TTACCTGATA CTCTTGAAGG GTTCGAACCC
TTCCTTAAGC AGCTAAAGGC GGCCGGTTTT GCTGGCCTTG TGCTGGATAA TCTGTCTGAG
CGACCAGATC CCGCCAAAGC ACTGGATGCC TGCACCAAGG CCGCTGAAAA GTTTGGCCTC
ATCACCGCTG CGGCAGTGAA CAGGGAAGAT GAGCTTGAGC ATGCCATCTC CCGGGTCGAA
CTTATCCTGA TAAGGGGCAA GCAAATGTTC AATCAGCCCC TGCTGGAACG CCTTGGTAAG
CTGCATCTAC CTGTGGTGCT TGAACGCAAT ACCATGGCCG ATATTGACGA ACTCCTGGCC
GCTGCCGATA CCATTCTGGC AGAAGGTAAC CAACAGCTGA TGCTGTGTGA GTCAGGAGTC
AGCAGCTTTA AGAGCAGCAC ACTTGCCACC CTGGATTTAG CCGGCTTAGT GGAGCTGAAA
GCCAGAAGTC ATCTGCCGGT GCTGGTCAAC CCCAGCTATG CAGTAACCCC TGAAGCCTGT
CCACGTCAGG CTAAAGCGGT TAAACGTCTC GGGGCCGATG GATTGTTGCT TGAGGTGTCG
CTGGACACCT CGATGGCTGA CAGTTATTTG GGTGAAACTT TGCGGCAGTT TTTTGTGTAA
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| Protein sequence | MEKPQPLSET REQITDIDNT VLQLLARRRE LSLEVARSKE VDVRPVRDTQ RERELLSRLV
QKGREQGLDP HFVMQLYQSI IEDSVLNQQA YLHGRANPET QKQQYCIAYL GARGSYSYLA
ANRYCQRRQV DMVDLGCQSF DEIVHAVESG HADYGFLPIE NTSSGSINEV YDVLQHTSLA
IVGETTIEVG HCLLAKPGTK ASDIKTLYAH PQPISQCSRY LARHPGLRLE YCASSAEAME
KVQAADSKDV AAIGSAEGGG LYQLEAIEKG LANQKVNQSR FIVVARKAVA VPEQLPAKCT
LIMATGQKPG ALVEALLVLK ANNLNMSKLE SRPIPGTPWE EMFYLDIDAN LASVPMQLAL
KELERITRFI KVLGCYPCET VAPTQLSNAQ LLIEPEHFRT DAPEPAAAQA RDGDSVPARH
SLGYKETVSE VQAGALLIGN GHSGALAMLS LPDTLEGFEP FLKQLKAAGF AGLVLDNLSE
RPDPAKALDA CTKAAEKFGL ITAAAVNRED ELEHAISRVE LILIRGKQMF NQPLLERLGK
LHLPVVLERN TMADIDELLA AADTILAEGN QQLMLCESGV SSFKSSTLAT LDLAGLVELK
ARSHLPVLVN PSYAVTPEAC PRQAKAVKRL GADGLLLEVS LDTSMADSYL GETLRQFFV
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