| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0889 |
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| Symbol | rpsP |
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| ID | 4603141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1078064 |
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| End bp | 1078315 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780224 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_926766 |
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| Protein GI | 119774026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000979344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.306742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTACCA TTCGTTTAGC TCGCGGCGGC GCTAAAAAGC GTCCTTTCTA CAACATCGTA
GTAACTGACT CTCGTAACGC CCGTGACGGC CGTTTCATCG AGCGCGTTGG TTTCTTCAAC
CCACTGGCCA AAGGTCAGGA AGAAACTCTG CGTCTGGATC TGGATCGCGT TGATCACTGG
GTTGGCAACG GTGCTTCTAC TACCGATCGC GTAGCCAAGC TGATCAAAGA CGCCCGTAAA
GCTGCTGCTT AA
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| Protein sequence | MVTIRLARGG AKKRPFYNIV VTDSRNARDG RFIERVGFFN PLAKGQEETL RLDLDRVDHW
VGNGASTTDR VAKLIKDARK AAA
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