| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0879 |
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| Symbol | |
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| ID | 4603131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1068870 |
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| End bp | 1069787 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780214 |
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| Product | Signal peptidase I |
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| Protein accession | YP_926756 |
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| Protein GI | 119774016 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.510509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.115217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCGT ATTTTTCACA AATTCTGGTG ATAGTCACCC TGGTGTCAGG GTTGATTTGG
CTGTTTGATG TGTTGTTTCA GGCCCCTAAG CGCAAGGCCG CATTGGCTGT GGCTCAGTCC
GGCGATGCCA ACCTGTCAGA AGACGCTGTC GAAGCCATCA CCAAGGAACC CTACATAGTC
GAAACCGCAC ACTCTGTGTT CCCGGTCATC GCCTTTGTAT TGGTGCTGCG TTCGTTCCTG
TATGAACCTT TTCAAATTCC GTCCGGCTCC ATGATGCCAA CCCTGTTGGT GGGGGACTTT
ATTCTGGTGG AAAAATTCAG CTACGGCATC AAAGAGCCTA TGTGGCGCAA AGAGGTTATC
GCCACAGGTA AGCCGGAGCG CGGTGATGTG GTGGTCTTCA AATACCCTGA AGATCCCAGA
ATTGACTATA TTAAGCGTGT GGTAGGCCTG CCGGGAGACC GCGTGTTTTA TCAAAACAAA
GAGCTCTACA TTCAGCGAGC CTGTGTTGAA GGCGAGATCT GCCAGAGCGT CCCAGCCAAG
GTTGACCGTA TTGCCCTTGG CGACAGCGAG TTTGTGCAGG ATGGCGTGCG TCTTAAGCAT
TACAAAGAGC AGCTTGGCGA CGTTGAGCAC GAAATTTTGA TTAATCCAGC CCGCCCCGAC
ATGCGCGGCA TGTTCTACCG CAAAGGCAGT GTGCCAGCGG GTGAATTTGT GGTGCCGGAA
GGCCAATACT TTGTGATGGG TGATAACCGC GACAACAGTA CCGACAGCCG TTTTTGGGGC
TTTGTGCCCG AAGAGAACCT TGTGGGTAAG GCCGTGGCCA TTTGGATTAG CTTTGAGTTT
GACCGCAAGC CATCTGACAC CCTGCCAACC TGGGTGCCCA CAGGTGTGCG TTTTGAGCGC
GTAGGCGGTA TCCAGTGA
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| Protein sequence | MAAYFSQILV IVTLVSGLIW LFDVLFQAPK RKAALAVAQS GDANLSEDAV EAITKEPYIV
ETAHSVFPVI AFVLVLRSFL YEPFQIPSGS MMPTLLVGDF ILVEKFSYGI KEPMWRKEVI
ATGKPERGDV VVFKYPEDPR IDYIKRVVGL PGDRVFYQNK ELYIQRACVE GEICQSVPAK
VDRIALGDSE FVQDGVRLKH YKEQLGDVEH EILINPARPD MRGMFYRKGS VPAGEFVVPE
GQYFVMGDNR DNSTDSRFWG FVPEENLVGK AVAIWISFEF DRKPSDTLPT WVPTGVRFER
VGGIQ
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