| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0868 |
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| Symbol | nhaA |
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| ID | 4603120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1059157 |
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| End bp | 1060332 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780203 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_926745 |
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| Protein GI | 119774005 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.128339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAG CTATTCGTAA TTTTTTGAGC CAGGAGTCTG CCGGTGGCAT TTTGCTGCTG
GTGGCTGTTG CACTGGCCAT GTTGCTCGCC AACTCACCGC TTTCCGGCTT GTATCAAGGG
TTTCTCAATA CCGAAATGCA GGTTCGTTTT GGGGCGCTGG ACATCAACAA ACCTCTGCTG
CTGTGGATTA ACGACGGCCT GATGGCTCTG TTCTTCCTGC TGATTGGTTT GGAAGTTAAA
CGTGAGTTGC TGGAAGGGGC CTTGTCGAGC CCATCCAAAG CATCCCTGCC TACCTTTGCC
GCCATCGGCG GTATGTTGGT TCCTGCAGCC ATCTACTTGT TTTTCAATTT TGACGATCCT
GTTACCAAGG TCGGCTGGGC CATTCCCGCT GCCACGGATA TTGCCTTTGC CCTGGGTATT
ATGGCGCTTC TGGGTAACCG GGTGCCGGTG GCGCTGAAAG TATTCCTGCT GGCGCTCGCC
ATCATCGATG ACCTGGGTGT GATTGTGATT ATCGCGCTCT TCTACAGCAC CGACTTATCT
ATGCTGAGCC TGGTGATTGC GGCGATTGCT GTTACTGGGT TGGTGGCACT TAATCGTAAG
GGCGTTACGT CCCTCGCGCC TTATGGGGTA CTCGGCATCA TATTGTGGAT AGCCGTGCTC
AAGTCCGGCG TGCACGCCAC CCTCGCCGGT GTGGTCATTG CCTTCTGTAT TCCGCTCAGG
GCTAAAGACG GCAGTTCACC TTCTGAGCAC CTTGAGCACA GCCTGCACCC CTGGAGTAAC
TTCCTCATTC TACCGGTGTT TGCCTTTGCC AATGCCGGGG TGCCGCTGGG CAACGTTGGA
TTTGACAGCA TACTGTCGCC CGTACCGGTT GGTATTGCCC TGGGTCTGCT GCTGGGTAAA
CCCATAGGTG TGCTGCTGTT CAGTTATGCA GCGGTGAAGC TGCGACTGGC CGAGCTGCCC
AAGGGGATTG GCTGGCACCA GATAGCGCCG GTGGCCGTCA TGTGTGGTAT CGGTTTCACC
ATGTCGATGT TTATTGCTTC TCTGGCCTTT GAGCATGGCG GAGAACTCTA TGGCGATTTG
GCCCGTATTG GCATCTTGCT GGGTTCACTG TTTGCTGCGG TAATTGGCTA TTTTTGGTTG
TCCAAAGTGT TGCCTAAAGC AGGAGAAAGA ATATGA
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| Protein sequence | MEKAIRNFLS QESAGGILLL VAVALAMLLA NSPLSGLYQG FLNTEMQVRF GALDINKPLL
LWINDGLMAL FFLLIGLEVK RELLEGALSS PSKASLPTFA AIGGMLVPAA IYLFFNFDDP
VTKVGWAIPA ATDIAFALGI MALLGNRVPV ALKVFLLALA IIDDLGVIVI IALFYSTDLS
MLSLVIAAIA VTGLVALNRK GVTSLAPYGV LGIILWIAVL KSGVHATLAG VVIAFCIPLR
AKDGSSPSEH LEHSLHPWSN FLILPVFAFA NAGVPLGNVG FDSILSPVPV GIALGLLLGK
PIGVLLFSYA AVKLRLAELP KGIGWHQIAP VAVMCGIGFT MSMFIASLAF EHGGELYGDL
ARIGILLGSL FAAVIGYFWL SKVLPKAGER I
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