| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0862 |
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| Symbol | |
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| ID | 4603114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1052366 |
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| End bp | 1053040 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780197 |
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| Product | DNA mismatch repair protein |
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| Protein accession | YP_926739 |
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| Protein GI | 119773999 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3066] DNA mismatch repair protein |
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| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000278549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0577392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACACTC CCCTCCCCCC TCAAAGTCTC GATGAATTGC TGCGCCGGGC CAAAATGATG
GCAGGCCTTT CCCTTGGGCA ACTCGCAGCA GGGCTGGGCT GGCCAGTCCC CGCAAACCTG
AAGCGGGATA AGGGCTGGAT AGGCCAGCTG ATAGAGCAAG AGCTGGGCGC CACCGCAGGC
TCAAGACCCG AACAGGACTT TCTGCATCTG GGGGTGGAGC TCAAAACCAT TCCCATCGAT
CGCAGCGGTA AGCCGTTGGA AACCACCTAT GTGTGTGTTG CTCCCTTAAT GGATACCCAT
GGGCTGCGTT GGGAGCAAAG TCTGGTAAAG CACAAACTCG AGCGGGTACT TTGGGTTCCG
GTGGAAGGCG AACGAGACAT TCCGGTTGCC GACAGGCGCA TAGGCACCGC TATTTTGTGG
CAACCCACGC CACAACAGAG TGCATCGCTT CGCCAGGACT GGGAAGAAAT CATGGAGTTC
ATCGCCCTGG GTAAGGTGCA TCGCCTCAGC GCAAGACACG GTGAGGTGTT ACAGCTTCGT
CCCAAAGCGG CCAATGCTGC TGCCAAAACC GAGTGCATTA TGGAAGACGG CACCGTCGGA
CTGACCAATC CCCGAGGCTT TTATCTGAAG ATCCCCTTCA CTCAAGCCAT ACTGCGCCAG
GCTTTTGACT ACTAG
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| Protein sequence | MNTPLPPQSL DELLRRAKMM AGLSLGQLAA GLGWPVPANL KRDKGWIGQL IEQELGATAG
SRPEQDFLHL GVELKTIPID RSGKPLETTY VCVAPLMDTH GLRWEQSLVK HKLERVLWVP
VEGERDIPVA DRRIGTAILW QPTPQQSASL RQDWEEIMEF IALGKVHRLS ARHGEVLQLR
PKAANAAAKT ECIMEDGTVG LTNPRGFYLK IPFTQAILRQ AFDY
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