Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0862 |
Symbol | |
ID | 4603114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1052366 |
End bp | 1053040 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780197 |
Product | DNA mismatch repair protein |
Protein accession | YP_926739 |
Protein GI | 119773999 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3066] DNA mismatch repair protein |
TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000278549 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0577392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTC CCCTCCCCCC TCAAAGTCTC GATGAATTGC TGCGCCGGGC CAAAATGATG GCAGGCCTTT CCCTTGGGCA ACTCGCAGCA GGGCTGGGCT GGCCAGTCCC CGCAAACCTG AAGCGGGATA AGGGCTGGAT AGGCCAGCTG ATAGAGCAAG AGCTGGGCGC CACCGCAGGC TCAAGACCCG AACAGGACTT TCTGCATCTG GGGGTGGAGC TCAAAACCAT TCCCATCGAT CGCAGCGGTA AGCCGTTGGA AACCACCTAT GTGTGTGTTG CTCCCTTAAT GGATACCCAT GGGCTGCGTT GGGAGCAAAG TCTGGTAAAG CACAAACTCG AGCGGGTACT TTGGGTTCCG GTGGAAGGCG AACGAGACAT TCCGGTTGCC GACAGGCGCA TAGGCACCGC TATTTTGTGG CAACCCACGC CACAACAGAG TGCATCGCTT CGCCAGGACT GGGAAGAAAT CATGGAGTTC ATCGCCCTGG GTAAGGTGCA TCGCCTCAGC GCAAGACACG GTGAGGTGTT ACAGCTTCGT CCCAAAGCGG CCAATGCTGC TGCCAAAACC GAGTGCATTA TGGAAGACGG CACCGTCGGA CTGACCAATC CCCGAGGCTT TTATCTGAAG ATCCCCTTCA CTCAAGCCAT ACTGCGCCAG GCTTTTGACT ACTAG
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Protein sequence | MNTPLPPQSL DELLRRAKMM AGLSLGQLAA GLGWPVPANL KRDKGWIGQL IEQELGATAG SRPEQDFLHL GVELKTIPID RSGKPLETTY VCVAPLMDTH GLRWEQSLVK HKLERVLWVP VEGERDIPVA DRRIGTAILW QPTPQQSASL RQDWEEIMEF IALGKVHRLS ARHGEVLQLR PKAANAAAKT ECIMEDGTVG LTNPRGFYLK IPFTQAILRQ AFDY
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