Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0858 |
Symbol | |
ID | 4603110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1048333 |
End bp | 1049286 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780193 |
Product | hypothetical protein |
Protein accession | YP_926735 |
Protein GI | 119773995 |
COG category | [R] General function prediction only |
COG ID | [COG1242] Predicted Fe-S oxidoreductase |
TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.104064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.132523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTCAAC CGGTTAGCGT AACGCCCACA TTGGATGCGC TGGTAAACAC CTTCGGCAAT GACTGCCGTC TTCGGTTTGG CAAGCGGGTA CGCAAGTTGA CCCTGGATGC GCATTTTACC TGCCCAAACC GCGATGGCAG TCTCGGCATT GGTGGCTGCA CTTTTTGCCA TGTGCCTTCT TTCAACGCCG ACGATGGCCA GCAGTTTGAT ATCCCATCGC AGCTTAAGCG GCAGATGGCC GGGCGAACTG ATGCGCTGTA TTTCATTTAT TTTCAGGCTT ACACCAGTAC CTACGATGAG GTTGCCGTAC TTAAGCGCAG ATACGATGAG GCGCTGTCGA TTGGGAATGT GGCGGGACTC TTTGTGGGAA CACGCCCTGA CTGTGTTCCT GATGCGGTGC TGCATTTGTT GGCCGACTAT CAACAGCAGG GGATCGATGT GTGGCTGGAT TTGGGGCTGC AGACCGCCCG GGATGACACC CTGAAAAGAA TCAATCGGGG CCATGATTTT GCCATATATG CTGATGCCGT GACCCGGGCC AGAAGGCTGG GCATCAAGGT GTGTACCCAT CTTATCCTGG GATTGCCCGG AGAGACGTCA GAGGATTTCG TCGAATCACA CCGGCAGGTG CTGGCACTTG GAGTCGATGG CCTCAAGCTG CATCCACTGC ATATAGTGGA AGGCAGCATC ATGGCGAGGC AGTGGCGGGC AGGAAGGCTC GATACCTTGA GTTTGGATGA TTACGTGAAC GCCGCGGTGC GTCTTATTCA ACGCACTCCG GCAGACATTA TTTTACACCG GGTTACGGCC CACGCCAGGC CGCCTTTGTT ATTGGCACCC GATTGGTGTG GTCATAAATG GTTGGGGATG GGGGCCATTT GCAGCAGTCT GGCACGAACG GGTGGCCAGG GCTGTTTGAC TGAATATCCT TACCTCAATG ATAAAAATAC GTAA
|
Protein sequence | MSQPVSVTPT LDALVNTFGN DCRLRFGKRV RKLTLDAHFT CPNRDGSLGI GGCTFCHVPS FNADDGQQFD IPSQLKRQMA GRTDALYFIY FQAYTSTYDE VAVLKRRYDE ALSIGNVAGL FVGTRPDCVP DAVLHLLADY QQQGIDVWLD LGLQTARDDT LKRINRGHDF AIYADAVTRA RRLGIKVCTH LILGLPGETS EDFVESHRQV LALGVDGLKL HPLHIVEGSI MARQWRAGRL DTLSLDDYVN AAVRLIQRTP ADIILHRVTA HARPPLLLAP DWCGHKWLGM GAICSSLART GGQGCLTEYP YLNDKNT
|
| |