| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0857 |
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| Symbol | gltB |
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| ID | 4603109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1043376 |
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| End bp | 1047827 |
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| Gene Length | 4452 bp |
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| Protein Length | 1483 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780192 |
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| Product | glutamate synthase subunit alpha |
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| Protein accession | YP_926734 |
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| Protein GI | 119773994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.245541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGT ATCATCCCAG TTTTGAGCGG GACAATTGTG GATTTGGTCT GATTGCCCAG
ATGGACGGCG AAGCCAGTCA CCGTATTGTG CGTACCGCCA TTACCGGACT GGATCGCATG
AAGCACCGCG GCGGCATTGC CGCAGATGGT CGCACGGGTG ATGGTTGCGG CCTCCTGATG
CAATTGCCCA TCAAGTTTTT CGAGTCGATT GCCGCCGAAA ATGACTGGCA CCTGTCGCGC
AAGTTTGCCG TCGGCATGTT CTTTTTAAGT CAGGACGAAG AAAAAGTCGC TGCCGCACGC
TTTGTGCTTG AGCGCGAGCT TGAAAAAGAA ACCCTCTGCA TCGCCGGTTG GCGTGAGGTG
CCTGTTAATC CCGATGTGCT GGGTGAAATA GGTAAGGCCA GCCTGCCACG TATCGTTCAG
GTACTGATTA ATGCGCCCAT TGGCTGGCGT GAAAAAGACC TCGAACGTCG CCTCTATATG
GCCCGTCGCC GCCTCGAGCA GCAAATGACT GCCGATCCCG ACTTCTATGT GGCCAGTCTT
TCTGGTCAGG TGATTGTTTA TAAAGGCCTG ATGATGCCAG CGGACCTGCC CGCCTTTTAT
CCCGATCTGG CCGATTTGCG TCTGGAAAGT GCTATCTGTT TGTTCCACCA GCGCTTTTCA
ACCAATACTT CTCCCAAGTG GCCACTGGCT CAGCCTTTCC GCTATCTGGC GCACAACGGT
GAAATCAACA CCATTACCGG CAACCGCCAG TGGGCCCGCG CCCGCGCGTA CAAGTTCAAT
TCGCCGCTGT TGCCCGATTT GCAGCAAGCC GCCCCCTTTG TAAACGAAAC CGGCTCTGAC
TCATCCTCTT TGGATAACAT GCTGGAAATG CTGCTCTCCG GCGGAATGGA CCTGTACCGT
GCCATGCGTT TGCTGATTCC GCCCGCATGG CAAAGTAACC CTGAAATGGA CGAAGAGCTC
AAAGCCTTCT ACGACTTTAA CTCCATGCAT ATGGAACCCT GGGATGGACC GGCGGGTATA
GTCATGACCA ACGGCCGCCA CGCCGCCTGC GCGGTGGACC GTAACGGCCT GCGTCCATCC
CGTTATGTGA TTACCAAGGA CCGCATACTG ACCCTGGCCT CTGAAGTGGG TATCTGGGAT
TACCAGCCCG ACGAGGTGGT GGAAAAGGGG CGCGTTGGTC CGGGTGAGCT TTTGGTGCTC
GATACCCTAA ACGGTCGCCT GTATCAGTCA TTCGAGATTG ATAACGACCT CAAACGCCGT
CATCCCTATA AAGAATGGAT GGCGAAGAAC AGCCGCACCC TCAAGAGTGC GGAAGAGATG
AGTAGCGAGC AGCACGGCGC CAGCGAATTC AGTCGTGATA CCCTGCTACA GTACCAAAAG
CTGTTTGGCT ACAGCCGTGA AGAACTCGAA CAGGTTATTT GGGTACTGGC AAGCCAGGGT
GAAGAGGCCG TGGGCTCCAT GGGCGACGAT ACCCCCATGG CGGTGCTGTC CAACAAACAG
CGCTCACTTT ACGACTACTT CCGCCAGAAA TTCGCCCAGG TGACAAACCC GCCCATCGAC
CCACTGCGTG AAAAACACGT GATGTCGCTG GCCACCTGTG TGGGCCGTGA GCAGAACCTC
TTCAATGAAA CCACAGGCCA CGCCTACCGG GTGATGTTCA ACTCGCCTGT TTTGCTGTTC
AGCGATTTCA ATCAGTTGAT GTCCCTCGAT AAAGCCTATT ACCGCGCCAA TATCGTTGAC
CTCAACTACG ACCCGGCAGA AGGGCTTGAA GGCGCCATTC GCCGCATCAC AGATGATGCC
GAGCGTCTGG CCCGCACCGG CACTACGCTG CTGGTGCTGT CTGACCGCGC CGTGGCCAAA
AACCGTCAGG TGATCCCGGC CGCCATGGCT GTGGGCGCCG TGCAGCAGAT GCTGGTATCC
AAGAGCCTGC GCTGCGACAC CAACATTATC GTGGAAACCG CCTCTGCCCG CGATCCACAC
CACTTTGCGG TGTTGCTGGG CTTTGGTGCC ACCGCCATCT ATCCCTACCT GGTGTATGAA
TCCATTGCCG ACCTGGCCAA GCGCAATGAC AGCGCCGACG ACATGGTGGC CTTGATGCTG
AACTTCCGTT ACGGCATCGA GAAAGGACTG CGCAAGATCA TGTCCAAGAT GGGTATCAGC
ACAGTGGCTT CATACCGCTG CAGCCAGCAG TTCGAGGCCA TAGGTCTGGC CCGCGATGTC
ATTGAACTCT GCTTTAAAGG CGTGGTGAGT CGCATCGAAG GGGTGAGCTT TGATCACCTT
GCCAAGGACC AGCATAAGCT GCATCAGGCC GCCTTCCGCC CCCACGTTTC CTTGCAACAG
GGCGGTTTGC TCAAGTACGT CGAAGGCGGT GAGTACCATG CCTTCAACCC TGATGTGGTC
AATACGCTGC AGGCTTCACT CATCAGTCGC GACTACAGCA AGTACAAGGC CTTTGCCAAG
CACGTCGATG AGCGTCCGGT GGCAATGCTC CGGGATCTGT TGGGCGTAAA AGGCACCCTC
GATGCCATTC CCGCCGACAC GGTAGAAGCC GCAGCCAACC TGTATCCCCG CTTCGACAGC
GCCGCCATGA GTATCGGTGC CTTAAGCCCC GAAGCCCACG AAGCGCTGGC CATTGCCATG
AACCGCCTCG GCGGCCGTTC CAACTCAGGG GAAGGCGGCG AAGACCCGCG CCGTTTCGGT
ACCGAGAAGA ACTCCGCCAT CAAGCAAATT GCCTCTGGCC GTTTTGGTGT CACCGCCCAT
TACCTTATCA ATGCCGAAGT GCTGCAGATT AAAGTGGCTC AGGGGGCTAA ACCCGGCGAA
GGCGGTCAGC TGCCCGGCCA CAAGGTGAGC GTGGAAATTG CCGGTCTGCG TTATGCCCGT
CCGGGCGTGA CCCTGATTTC GCCACCGCCG CACCACGACA TCTATTCCAT TGAAGATTTG
GCGCAGCTGA TTTTCGATTT GAAGCAAATC AACCCCAAGG CCCTTATCAG CGTAAAACTG
GTATCAGAGC CGGGCATTGG CACCATCGCC ACGGGTGTTG CCAAGGCCTA TGCCGACATG
ATTACCGTGT CCGGCTATGA CGGTGGCACC GGGGCAAGCC CCCTCACCTC GGTCAAGTAT
GCCGGCTCGC CTTGGGAGCT GGGTCTGGCA GAGGTGCATC AGGCTCTGGT GGACAACGGC
CTGCGCCACA AAATCCGCCT GCAGGTGGAC GGCGGCCTCA AAACAGGTAC CGACGTTATC
AAGGCCGCAT TGCTTGGCGC CGAGAGTTTT GGCTTCGGCA CAGTGCCTAT GATTGCGCTG
GGCTGTAAAT ATCTGAGAAT CTGCCACCTG AACAACTGCG CCACCGGCGT GGCAACCCAG
GATAAAAATC TGCGCGATAA ACACTTCCAC GGCTTGCCTG AGCGGGTGAT GACTTACTTC
GAATTTGTTG CCGAAGAAGT CCGTGAGTGG ATGGCCAGGC TGGGTGTTGC AAAGTTTGAA
GATCTGGTAG GTCGCAGCGA CTGGTTGTAC GCACTGGCGG GACAAACCGA GAAGCAACAT
GGTCTGGATC TGTCCCCCAT CCTGTATCAG CCACAGGTAC GCGCTGGGTC ATCCAGAACC
TGGAAAGAGA TAAACCCACC GACGGATACC GGTGAGCTGA ACCAGCGTCT GCTGAAAGAT
GCCGCCGATG CCATCAGCCG CGGCGAAGGT TTCAGCGCCG CCTACAGCAT CAACAACACA
GATCGCTCAG TGGGCGCCGC CCTCAGTGGC CACATCGCTG CCTGCTGTGG TCTCAAGGGC
ACCAAGGCGC CGGTCAGCCT GTCATTTAAC GGCACCGCCG GCCAAAGTTT TGGTGTGTGG
AACGCCCCCG GACTGGAAAT GAGCCTGTGC GGTGATGCCA ACGACTATGT GGGCAAGGGG
ATGTCCGGCG GCAAGCTGTC CATCTACCCG CCACTTGGCA GTGCCTTCCA GAGCGAGCGC
ACCGCCATCG TGGGCAATAC CTGCCTCTAT GGCGCAACCG GCGGCCAGTT CTTTGCTGCG
GGCCAGGCGG GTGAACGCTT CGGTGTGCGC AACTCAGGCG CCGTGGCGGT GGTAGAAGGC
CTTGGCGACA ACGGCTGCGA ATATATGACC GGCGGCATTG TGGTGGTATT GGGTAAAACC
GGGGTGAACT TTGGCGCCGG TATGACAGGT GGCTTTGCCT ACGTGTTCGA CCAGTTCGGC
CGCTTTGGCC GCAGGGTAAA CACCGAAATG GTCGACACCC AAAAGGTGGA GTCAGCCATT
CACCAGAAAC ACCTCAAAGG CCTGATAGAG GCCCACGTCA AAGAGACCGG CAGCGAACAT
GCCCGGGCGA TTTTGAGTGA CTTTGATAAC TGGCTCGACT GCTTCGTGCT GGTCAAGCCG
AAGAATGTAG CGGTGGCCGA TCTGCTCAAA CTCGAGCAGC CAAGCCCTGA ACTGGCAGTA
AAGGCGGGGT AA
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| Protein sequence | MSLYHPSFER DNCGFGLIAQ MDGEASHRIV RTAITGLDRM KHRGGIAADG RTGDGCGLLM
QLPIKFFESI AAENDWHLSR KFAVGMFFLS QDEEKVAAAR FVLERELEKE TLCIAGWREV
PVNPDVLGEI GKASLPRIVQ VLINAPIGWR EKDLERRLYM ARRRLEQQMT ADPDFYVASL
SGQVIVYKGL MMPADLPAFY PDLADLRLES AICLFHQRFS TNTSPKWPLA QPFRYLAHNG
EINTITGNRQ WARARAYKFN SPLLPDLQQA APFVNETGSD SSSLDNMLEM LLSGGMDLYR
AMRLLIPPAW QSNPEMDEEL KAFYDFNSMH MEPWDGPAGI VMTNGRHAAC AVDRNGLRPS
RYVITKDRIL TLASEVGIWD YQPDEVVEKG RVGPGELLVL DTLNGRLYQS FEIDNDLKRR
HPYKEWMAKN SRTLKSAEEM SSEQHGASEF SRDTLLQYQK LFGYSREELE QVIWVLASQG
EEAVGSMGDD TPMAVLSNKQ RSLYDYFRQK FAQVTNPPID PLREKHVMSL ATCVGREQNL
FNETTGHAYR VMFNSPVLLF SDFNQLMSLD KAYYRANIVD LNYDPAEGLE GAIRRITDDA
ERLARTGTTL LVLSDRAVAK NRQVIPAAMA VGAVQQMLVS KSLRCDTNII VETASARDPH
HFAVLLGFGA TAIYPYLVYE SIADLAKRND SADDMVALML NFRYGIEKGL RKIMSKMGIS
TVASYRCSQQ FEAIGLARDV IELCFKGVVS RIEGVSFDHL AKDQHKLHQA AFRPHVSLQQ
GGLLKYVEGG EYHAFNPDVV NTLQASLISR DYSKYKAFAK HVDERPVAML RDLLGVKGTL
DAIPADTVEA AANLYPRFDS AAMSIGALSP EAHEALAIAM NRLGGRSNSG EGGEDPRRFG
TEKNSAIKQI ASGRFGVTAH YLINAEVLQI KVAQGAKPGE GGQLPGHKVS VEIAGLRYAR
PGVTLISPPP HHDIYSIEDL AQLIFDLKQI NPKALISVKL VSEPGIGTIA TGVAKAYADM
ITVSGYDGGT GASPLTSVKY AGSPWELGLA EVHQALVDNG LRHKIRLQVD GGLKTGTDVI
KAALLGAESF GFGTVPMIAL GCKYLRICHL NNCATGVATQ DKNLRDKHFH GLPERVMTYF
EFVAEEVREW MARLGVAKFE DLVGRSDWLY ALAGQTEKQH GLDLSPILYQ PQVRAGSSRT
WKEINPPTDT GELNQRLLKD AADAISRGEG FSAAYSINNT DRSVGAALSG HIAACCGLKG
TKAPVSLSFN GTAGQSFGVW NAPGLEMSLC GDANDYVGKG MSGGKLSIYP PLGSAFQSER
TAIVGNTCLY GATGGQFFAA GQAGERFGVR NSGAVAVVEG LGDNGCEYMT GGIVVVLGKT
GVNFGAGMTG GFAYVFDQFG RFGRRVNTEM VDTQKVESAI HQKHLKGLIE AHVKETGSEH
ARAILSDFDN WLDCFVLVKP KNVAVADLLK LEQPSPELAV KAG
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