| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0850 |
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| Symbol | |
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| ID | 4603102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1037269 |
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| End bp | 1038468 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780185 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_926727 |
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| Protein GI | 119773987 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.508518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.448764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT TGGACCAGGT ATTAGCAGAA ATTAAACGGG GCACAGACGA GATCCTGCTC
GAAGCAGATC TGATTGAGAA ACTGAAAGAG GGCCGTCCAC TGCGGGTGAA GCTGGGTGCC
GATCCTACCG CTCCCGATAT CCATCTGGGC CACACGGTTA TTCTGAACAA ACTGCGTCTG
TTTCAGGAGC TGGGGCACGA AGTTATCTTC CTTATCGGTG ACTTCACCGG CATGGTAGGT
GACCCAAGTG GTAAAAACAG TACCCGTCCG CCACTGACCC GTGAGCAGGT TCTGGCCAAC
GCTGAAACCT ACAAGGAACA GGTGTACAAA ATTCTCGATC CGGCCAAGAC GCGCATCGAA
TTCAACTCCA GCTGGCTTGA GCAGCTTGGT GCTGCCGGCA TGATCCGCCT GGCTTCCCAT
CAAACCGTGG CCCGCATGCT GGAACGTGAT GATTTTAAAA AGCGTTATGG CAGCGGTCAG
CCCATCGCCA TCCATGAGTT TATGTACCCG CTGCTGCAGG GTTGGGACTC GGTTGCGCTG
AAGGCAGACA TTGAACTGGG TGGTACCGAT CAGAAGTTCA ACCTGCTGAT GGGCCGGGAG
CTGCAAAAGG CCGAAGGTCA GAAGCCGCAG ACAGTGATTA TGATGCCGCT GCTGGAAGGT
CTCGATGGCG TCAAGAAGAT GTCCAAGTCT GCCCACAACT ATATAGGTGT GAGCGAAGCG
CCGGATGAAA TGTTCGGTAA GCTGATGTCT ATTTCAGACG AGCTGATGTG GCGCTACTTC
GATCTGTTGT CGTTCCGCCC ATTGGCAGAA GTACAGCAGT TCAAGGCCGA TGTGGAAGCC
GGAGCCAACC CAAGAGACAT CAAGATCGCG CTCGCCAAGG AAATCATTGC CCGTTTCCAC
GACCAGGCCG CCGCCGATGC TGCTCATCAG AACTTTATCG ACCGTTTCCA GAAGGGGGCT
ATCCCCGATG ATATCGAAGA AGTAACCCTG AGCGCAGGTG CTGAAGGTAT GGCAGTGGCC
AACCTGCTCA AAGAAGCTGG TCTCGTGGGT TCGACCTCCG ATGCCATGCG AATGATTAAG
CAGGGAGCGG TGAAAATGGA CGGTGAAAAG CTGGAAGATG CCAAGCAGGT ATTCAGTGCC
GGTCTGAGCG CCGTATTCCA GGTTGGCAAG CGCAAGTTTG CCAAGGTGAC TCTGAGCTAA
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| Protein sequence | MADLDQVLAE IKRGTDEILL EADLIEKLKE GRPLRVKLGA DPTAPDIHLG HTVILNKLRL
FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK ILDPAKTRIE
FNSSWLEQLG AAGMIRLASH QTVARMLERD DFKKRYGSGQ PIAIHEFMYP LLQGWDSVAL
KADIELGGTD QKFNLLMGRE LQKAEGQKPQ TVIMMPLLEG LDGVKKMSKS AHNYIGVSEA
PDEMFGKLMS ISDELMWRYF DLLSFRPLAE VQQFKADVEA GANPRDIKIA LAKEIIARFH
DQAAADAAHQ NFIDRFQKGA IPDDIEEVTL SAGAEGMAVA NLLKEAGLVG STSDAMRMIK
QGAVKMDGEK LEDAKQVFSA GLSAVFQVGK RKFAKVTLS
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