Gene Sama_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0848 
SymbolanmK 
ID4603100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1034646 
End bp1035755 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content56% 
IMG OID639780183 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_926725 
Protein GI119773985 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.134258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.442954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAT CTTTGTTTAT CGGACTCATG TCCGGCACCA GTATGGACGG TGTGGACGCT 
GTCCTGGTGG ATTTCGACAC TCCATCCCCC AAACTCATTG CCACCCACAC AGAAGCCATT
CCGGAACACC TGTTCAAAGG GCTGCAGCGT TTATGTCAGC CCGGACAGGA TGAAGTAAAT
CGGCTTGGAC GACTCGACCG CAGCGTTGGC AGTCTCTTTG CCAAAGCCGT CAACAACCTG
CTTGCCAGCA GTGGCATAGA TAAGTCCCAG GTCGTGGCCA TTGGCAGCCA TGGTCAAACC
GTTAGGCACA TGCCCAACCT CGAGGTGGGG TTCACTGTGC AAATCGGCGA TCCCAACACC
ATTGCCGCCG AAACAGGTAT CGATGTCATT GCTGATTTTC GCCGCAAAGA TATTGCACTT
GGCGGCCAGG GAGCACCGCT GGTCCCGGCA TTCCACCAGC AGATTTTTGC TAAAGCAGAT
AAACGCCGGG TGATCCTCAA CATAGGTGGT ATCGCCAATA TCACCTGGTT GCCGGGCAAT
GCAGAGGCTG TACTTGGATT TGATACCGGG CCGGGCAACA CCCTGATAGA TGGCTGGATA
CAGCAGGTAA AACAACAGGC TTTCGATCGG GACGGCGCCT TTGCCGCCAG TGGTAAAACC
GACAATACGC TCTTGGCCCA GTTGCTGTCG CATCCGTATT TTATGCAGCC ATACCCCAAG
AGCACCGGTC GTGAGCTTTT CAATAACGCT TGGCTGGAAC AGCAACTGGA AAAGTTTGGC
CACCTCGACG AGGCCGATAT TCAGTCAACC CTGCTGGACT TAACCTGCCA CAGTATCGCG
GCGGATATTC TCAAGCTGTC AAACAGTGGC GAGTTGTTTG TATGCGGCGG TGGCGCCCTC
AATATTGAGC TGATGAACCG CCTGCAGGCC CTGTTACCCG GGTTTACACT GACTACCACT
TCGGTGCTTG GAGTTGACCC GAAATGGGTT GAGGCCATCG CCTTTGCCTG GCTTGCCCTG
CGCCACCATC AGGGACTGCC GGCCAACCTG CCCGCCGTGA CAGGGGCAAG ACGCGAAGCC
ATACTCGGCG CCCGCTTCCC GGCGGCTTGA
 
Protein sequence
MSQSLFIGLM SGTSMDGVDA VLVDFDTPSP KLIATHTEAI PEHLFKGLQR LCQPGQDEVN 
RLGRLDRSVG SLFAKAVNNL LASSGIDKSQ VVAIGSHGQT VRHMPNLEVG FTVQIGDPNT
IAAETGIDVI ADFRRKDIAL GGQGAPLVPA FHQQIFAKAD KRRVILNIGG IANITWLPGN
AEAVLGFDTG PGNTLIDGWI QQVKQQAFDR DGAFAASGKT DNTLLAQLLS HPYFMQPYPK
STGRELFNNA WLEQQLEKFG HLDEADIQST LLDLTCHSIA ADILKLSNSG ELFVCGGGAL
NIELMNRLQA LLPGFTLTTT SVLGVDPKWV EAIAFAWLAL RHHQGLPANL PAVTGARREA
ILGARFPAA