| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0832 |
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| Symbol | |
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| ID | 4603084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1015265 |
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| End bp | 1016080 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780167 |
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| Product | ribosomal RNA large subunit methyltransferase A, putative |
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| Protein accession | YP_926709 |
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| Protein GI | 119773969 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000147805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTC AGTGTCCACT TTGTCGCCAA CGGCTGCACT TTCACGAAGA GTCCCGTGGA
TGGCATTGCG ATGGCAAACA TCACTTCGAC AAGAAAGAAA TCGGCTATTG GGATTTCTAC
AAGGGCAACA AACCCCGTAA TGCCGAAAGC CGTCAGGAGC TGCGTGCCAG ACAGTTTCTG
GTGACCTCTG GCCTGTTTCA GCCAGCAGTA GAGGCCATGG TGAAGGTGCT GCAAACCCAG
GACTGCGGAA GCGAGCGCAA CTGCGTTAAC CTGGGGCCAG GACATGCCTG GATTGGAAAG
TTATTGGCGC AAGCGCTGTC TGAACATGAG TTGCCACTTA AGGTATTCAG TCCATTGGAG
TCAGAAAACG AAGCTTTTGC TGCAGCCAAA TCAGGAATGG AGGCCGTTTG TCTGACACCG
CTCAAATCGC TGCCCTTTGC CGATGCATCA GCCGATATGG TGTGGCTTCT GGATATTCCA
GCCAAAGGAA AGGAATGGCA GCGAATACTG AAACCGGGCG GATTGTTATT GATGTTGGCA
GCCGGACCAA GACACCTTTG GCAAATTAAA GAATTTGTCT ATGAAGGATT AACTGAAAAG
CCATTTGTGT TGGAGCTTTC CGGCCAATTT GACTTGATAA GTCAAACCCC GGTTTCATGG
ACTCATGCCC TCAGTGTGGC TGATGCCAAG GTATTAATGG GTATGGCTCC CTGGGCCTGG
CGGGTAAAAG AAGCCAGTTT AAAGGCGATG GAAAAGGGAG ATTTTTCCGG ATTGGAAATG
GATTATCGGA TCATTCTTGC CAAAAAGCGG GTATAA
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| Protein sequence | MEFQCPLCRQ RLHFHEESRG WHCDGKHHFD KKEIGYWDFY KGNKPRNAES RQELRARQFL
VTSGLFQPAV EAMVKVLQTQ DCGSERNCVN LGPGHAWIGK LLAQALSEHE LPLKVFSPLE
SENEAFAAAK SGMEAVCLTP LKSLPFADAS ADMVWLLDIP AKGKEWQRIL KPGGLLLMLA
AGPRHLWQIK EFVYEGLTEK PFVLELSGQF DLISQTPVSW THALSVADAK VLMGMAPWAW
RVKEASLKAM EKGDFSGLEM DYRIILAKKR V
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