| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0827 |
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| Symbol | |
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| ID | 4603079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1011529 |
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| End bp | 1012542 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780162 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_926704 |
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| Protein GI | 119773964 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000342957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTTT TGGGAATCGA GACGTCCTGT GATGAAACAG GCATCGCCAT CTACGACGAA
GAGAAAGGCC TGATGGCCCA CACTCTGTAC AGCCAGGTCA AACTGCACGC CGATTACGGT
GGGGTTGTGC CTGAGCTGGC TTCCCGTGAC CATGTGCGTA AGATTATTCC GCTTATTCGC
GAAGCCCTGA AAAATGCCGA TACCCGTATC GAAGATCTGG ATGGGATCTG CTACACCAAG
GGCCCCGGTC TGATTGGTGC GCTGCTGGTT GGCGCCTGTG TAGGCCGCTC GTTGGCGTTT
TCCTGGAATC TGCCCGCCGT GGGTGTGCAC CATATGGAAG GCCATTTGCT GGCACCGATG
CTCGAAGACG AGGTGCCTGA GTTCCCCTTT GTGGCGCTGC TGGTTTCCGG TGGTCATTCT
ATGCTGGTGA AAGTAGATGG TATAGGCCAG TACGAGGTGC TTGGTGAGTC CATCGATGAT
GCCGCCGGAG AGGCCTTCGA TAAAACGGCC AAGCTGATGG GGCTTGATTA TCCGGGCGGT
CCGCGTCTTG CCAAGCTCGC GGCCTCGGGT CAGCCAGCCA ACTACAAGTT TCCGCGCCCA
ATGACCGACA GACCCGGGCT GGACTTCAGT TTCTCCGGGC TTAAAACCTT CGTAGCCAAT
ACTATCGCTG CCGAACCGGA TGATGAGCAG ACCCGCGCCA ATATCGCCCG TGCTTTCGAA
GAGGCGGTGG TGGATACCCT GTCTATCAAG TGTCGCCGAG CACTGGAGCA AACCGGTTAC
AAACGCCTTG TTATTGCCGG TGGTGTGAGT GCCAACGTGC GCCTGCGCGC AGGTCTTGCA
GAGCTGATGG AAAAACTGGG TGGCAAGGTG TACTACCCCC GAGGGGAATT CTGTACCGAC
AATGGTGCCA TGATTGCCTA TGCCGGTTTG CAGAGGCTGA AAGCGGGACA GCTTGAAGAT
TTGGCAGTAA AAGGTCAGCC TCGATGGCCA CTGGATACCT TGCTACCGGT GTGA
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| Protein sequence | MRVLGIETSC DETGIAIYDE EKGLMAHTLY SQVKLHADYG GVVPELASRD HVRKIIPLIR
EALKNADTRI EDLDGICYTK GPGLIGALLV GACVGRSLAF SWNLPAVGVH HMEGHLLAPM
LEDEVPEFPF VALLVSGGHS MLVKVDGIGQ YEVLGESIDD AAGEAFDKTA KLMGLDYPGG
PRLAKLAASG QPANYKFPRP MTDRPGLDFS FSGLKTFVAN TIAAEPDDEQ TRANIARAFE
EAVVDTLSIK CRRALEQTGY KRLVIAGGVS ANVRLRAGLA ELMEKLGGKV YYPRGEFCTD
NGAMIAYAGL QRLKAGQLED LAVKGQPRWP LDTLLPV
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